RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ZDHHC14Q8IZN3 488 aa6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 DHX38Q92620 1227 aaKnown RBP6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 GPR62Q9BZJ7 368 aa6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 GPATCH2Q9NW75 528 aa6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 TJP2Q9UDY2 1190 aa6.83□□□□□ -1.32
NCKAP1-204ENST00000477988 USP17L7P0C7H9 530 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 INSRRP14616 1297 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 CDK8P49336 464 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 ATP2B2Q01814 1243 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 ZSCAN29Q8IWY8 852 aaPredicted RBP6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 TMEM87BQ96K49 555 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 FRMD6Q96NE9 622 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 DUSP13Q9UII6 198 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 CEP131Q9UPN4 1083 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
NCKAP1-204ENST00000477988 HRKO00198 91 aa6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 SPPL2CQ8IUH8 684 aa6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 SP8Q8IXZ3 490 aa6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 DNAJB8Q8NHS0 232 aa6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 SYTL4Q96C24 671 aaPredicted RBP6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 GTF3C3Q9Y5Q9 886 aa6.81□□□□□ -1.32
NCKAP1-204ENST00000477988 ZC3H12DA2A288 527 aaKnown RBP6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 PGRP06401 933 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 LMNB1P20700 586 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 PDE4BQ07343 736 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 PUM1Q14671 1186 aaKnown RBP eCLIP6.8□□□□□ -1.322e-7■■■■■ 30.4
NCKAP1-204ENST00000477988 MCATQ8IVS2 390 aaKnown RBP6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 SYT8Q8NBV8 401 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 ADAM7Q9H2U9 754 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 EBF1Q9UH73 591 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 GPR160Q9UJ42 338 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 ADAM30Q9UKF2 790 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 KCNH3Q9ULD8 1083 aa6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 TTF2Q9UNY4 1162 aaKnown RBP6.8□□□□□ -1.32
NCKAP1-204ENST00000477988 OR14I1A6ND48 311 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 SUV39H1O43463 412 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 CHRNEQ04844 493 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 VMACQ2NL98 169 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 FRMD5Q7Z6J6 570 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 SETDB2Q96T68 719 aa6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 DPH2Q9BQC3 489 aaPredicted RBP6.79□□□□□ -1.32
NCKAP1-204ENST00000477988 IRS4O14654 1257 aaPredicted RBP6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 N4BP3O15049 544 aa6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 EPHB3P54753 998 aa6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 PLP2Q04941 152 aa6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 WWC3Q9ULE0 1092 aa6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 PCDHA11Q9Y5I1 949 aa6.78□□□□□ -1.32
NCKAP1-204ENST00000477988 NOTOA8MTQ0 251 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 AKAP8O43823 692 aaKnown RBP6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 GALK1P51570 392 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 SEPT6Q14141 434 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 AGMOQ6ZNB7 445 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 ANKS4BQ8N8V4 417 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 ASB16Q96NS5 453 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 CNTD2Q9H8S5 307 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 PCDHB5Q9Y5E4 795 aa6.77□□□□□ -1.33
NCKAP1-204ENST00000477988 LTKP29376 864 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 DUSP4Q13115 394 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 HHIPL2Q6UWX4 724 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 TMEFF1Q8IYR6 380 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 PPP1R13LQ8WUF5 828 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 BDH2Q9BUT1 245 aa6.76□□□□□ -1.33
NCKAP1-204ENST00000477988 CILPO75339 1184 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 EFEMP2O95967 443 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 CCDC85BQ15834 202 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 TSNAXIP1Q2TAA8 658 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 NLRX1Q86UT6 975 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 ACSF2Q96CM8 615 aaPredicted RBP6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 MIR1-1HGQ9H1L0 117 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 SIRT5Q9NXA8 310 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 ZNF281Q9Y2X9 895 aa6.75□□□□□ -1.33
NCKAP1-204ENST00000477988 BRD1O95696 1058 aa6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 RPL6Q02878 288 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 ADGRF1Q5T601 910 aa6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 FAM129CQ86XR2 697 aa6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 LINC01356Q8N9X3 169 aa6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 RNF141Q8WVD5 230 aa6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 CNOT11Q9UKZ1 510 aaKnown RBP6.74□□□□□ -1.33
NCKAP1-204ENST00000477988 EIF4BP23588 611 aaKnown RBP6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 VIPR1P32241 457 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 LIG3P49916 1009 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 TEKQ02763 1124 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 RTP5Q14D33 572 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 DIEXFQ68CQ4 756 aaKnown RBP6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 CNKSR3Q6P9H4 555 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 TP53I13Q8NBR0 393 aaPredicted RBP6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 GPR20Q99678 358 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 G6PC3Q9BUM1 346 aa6.73□□□□□ -1.33
NCKAP1-204ENST00000477988 RBM47A0AV96 593 aaKnown RBP6.72□□□□□ -1.33
NCKAP1-204ENST00000477988 PRICKLE3O43900 615 aaPredicted RBP6.72□□□□□ -1.33
NCKAP1-204ENST00000477988 RLBP1P12271 317 aa6.72□□□□□ -1.33
NCKAP1-204ENST00000477988 YARSP54577 528 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms