RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NECTIN1Q15223 517 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 IQCA1Q86XH1 822 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 TTC14Q96N46 770 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 VCPKMTQ9H867 229 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 CLIP2Q9UDT6 1046 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 LOC285556D6RIA3 1793 aa15.49■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L15C9J2P7 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L13C9JLJ4 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L11C9JVI0 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L18D6R9N7 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L22D6RA61 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L17D6RBQ6 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L19D6RCP7 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L20D6RJB6 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 USP17L24Q0WX57 530 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 CRHR2Q13324 411 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
TOP3A-205ENST00000477508 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
TOP3A-205ENST00000477508 NEDD4P46934 1319 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 E7EWF7 191 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 TLR2O60603 784 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 HSPA8P11142 646 aaKnown RBP15.47■□□□□ 0.07
TOP3A-205ENST00000477508 ZKSCAN1P17029 563 aaPredicted RBP15.47■□□□□ 0.07
TOP3A-205ENST00000477508 VCAM1P19320 739 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 NOVP48745 357 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
TOP3A-205ENST00000477508 ZYXQ15942 572 aaKnown RBP15.47■□□□□ 0.07
TOP3A-205ENST00000477508 TREML2Q5T2D2 321 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 CREB3L3Q68CJ9 461 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 CLEC10AQ8IUN9 316 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 NCOA7Q8NI08 942 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 GTF3C2Q8WUA4 911 aaPredicted RBP15.47■□□□□ 0.07
TOP3A-205ENST00000477508 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 STX8Q9UNK0 236 aa15.47■□□□□ 0.07
TOP3A-205ENST00000477508 B4E1Z4 1266 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 SLC27A2O14975 620 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 WDR46O15213 610 aaKnown RBP15.46■□□□□ 0.07
TOP3A-205ENST00000477508 KDM4AO75164 1064 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 GCLCP48506 637 aaPredicted RBP15.46■□□□□ 0.07
TOP3A-205ENST00000477508 DGKHQ86XP1 1220 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 GMCL1P1Q8NEA9 526 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 SMCR8Q8TEV9 937 aaPredicted RBP15.46■□□□□ 0.07
TOP3A-205ENST00000477508 UBAC1Q9BSL1 405 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 ASCC2Q9H1I8 757 aaPredicted RBP15.46■□□□□ 0.07
TOP3A-205ENST00000477508 PRDM10Q9NQV6 1147 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 ZSWIM5Q9P217 1185 aa15.46■□□□□ 0.07
TOP3A-205ENST00000477508 F5H6K3 240 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 GPR25O00155 361 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 TOP1P11387 765 aaKnown RBP15.45■□□□□ 0.06
TOP3A-205ENST00000477508 LBX1P52954 281 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 KLRC3Q07444 240 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 KRT32Q14532 448 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 TSGA10IPQ3SY00 556 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 CATSPERGQ6ZRH7 1159 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 RPAP3Q9H6T3 665 aaPredicted RBP15.45■□□□□ 0.06
TOP3A-205ENST00000477508 HOXC10Q9NYD6 342 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 MYH4Q9Y623 1939 aa15.45■□□□□ 0.06
TOP3A-205ENST00000477508 FKTNO75072 461 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 CYP2C8P10632 490 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 DGKZQ13574 1117 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 SART3Q15020 963 aaKnown RBP15.44■□□□□ 0.06
TOP3A-205ENST00000477508 ARHGEF6Q15052 776 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 ANKS1AQ92625 1134 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 ZSCAN10Q96SZ4 725 aaPredicted RBP15.44■□□□□ 0.06
TOP3A-205ENST00000477508 MTA3Q9BTC8 594 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 TSKSQ9UJT2 592 aa15.44■□□□□ 0.06
TOP3A-205ENST00000477508 MYPNQ86TC9 1320 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 ERICH2A1L162 156 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 RAD21O60216 631 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 NMT2O60551 498 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 NDUFB10O96000 172 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 MCCP23508 829 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 SP3Q02447 781 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 COG2Q14746 738 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 SLFN13Q68D06 897 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 C17orf99Q6UX52 265 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 SPICE1Q8N0Z3 855 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
TOP3A-205ENST00000477508 GMCL1Q96IK5 515 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 TANGO6Q9C0B7 1094 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 R3HDMLQ9H3Y0 253 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 ADGRA2Q96PE1 1338 aa15.43■□□□□ 0.06
TOP3A-205ENST00000477508 HMGB1P09429 215 aaKnown RBP15.42■□□□□ 0.06
TOP3A-205ENST00000477508 MCM5P33992 734 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 HSPA4P34932 840 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 HERVK_113P62684 666 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 LBX2Q6XYB7 198 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 STOX1Q6ZVD7 989 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 KCNB2Q92953 911 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 ERO1AQ96HE7 468 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 P2RX7Q99572 595 aaKnown RBP15.42■□□□□ 0.06
TOP3A-205ENST00000477508 TMEM47Q9BQJ4 181 aa15.42■□□□□ 0.06
TOP3A-205ENST00000477508 FLOT1O75955 427 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 BCRP11274 1271 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 BMP3P12645 472 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 KIF22Q14807 665 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 FAM110CQ1W6H9 321 aa15.41■□□□□ 0.06
TOP3A-205ENST00000477508 KIAA1755Q5JYT7 1200 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms