RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CCDC178Q5BJE1 867 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 PPP4R3BQ5MIZ7 849 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 DHX32Q7L7V1 743 aaKnown RBP19.75■□□□□ 0.75
EPHB4-204ENST00000477446 ENAHQ8N8S7 591 aaPredicted RBP19.75■□□□□ 0.75
EPHB4-204ENST00000477446 TNPO1Q92973 898 aaKnown RBP19.75■□□□□ 0.75
EPHB4-204ENST00000477446 MKL1Q969V6 931 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
EPHB4-204ENST00000477446 MS4A4AQ96JQ5 239 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 TTC14Q96N46 770 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 FEZ1Q99689 392 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 KIAA1683Q9H0B3 1180 aa19.75■□□□□ 0.75
EPHB4-204ENST00000477446 WDR33Q9C0J8 1336 aaKnown RBP19.75■□□□□ 0.75
EPHB4-204ENST00000477446 IFIT3O14879 490 aaKnown RBP19.74■□□□□ 0.75
EPHB4-204ENST00000477446 GTF2A2P52657 109 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 SNAPC2Q13487 334 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 SEC23AQ15436 765 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 ZYXQ15942 572 aaKnown RBP19.74■□□□□ 0.75
EPHB4-204ENST00000477446 BLOC1S2Q6QNY1 142 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 DGKHQ86XP1 1220 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 IGDCC4Q8TDY8 1250 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 TCEANC2Q96MN5 208 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 TM6SF1Q9BZW5 370 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 ZSWIM6Q9HCJ5 1215 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 A0A0G2JLL6 359 aaPredicted RBP19.74■□□□□ 0.75
EPHB4-204ENST00000477446 C19orf81C9J6K1 198 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 HMGCS2P54868 508 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 NOGQ13253 232 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 DGKZQ13574 1117 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 CUL4AQ13619 759 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 PRRT2Q7Z6L0 340 aaPredicted RBP19.74■□□□□ 0.75
EPHB4-204ENST00000477446 ANKS1AQ92625 1134 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 TMEM47Q9BQJ4 181 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 LRRC2Q9BYS8 371 aa19.74■□□□□ 0.75
EPHB4-204ENST00000477446 WDR19Q8NEZ3 1342 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 ERICH2A1L162 156 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 AOC2O75106 756 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 RPS6KB1P23443 525 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 SART3Q15020 963 aaKnown RBP19.73■□□□□ 0.75
EPHB4-204ENST00000477446 SH3D19Q5HYK7 790 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 RUFY3Q7L099 469 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 LRRC47Q8N1G4 583 aaKnown RBP19.73■□□□□ 0.75
EPHB4-204ENST00000477446 MTA3Q9BTC8 594 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 UPF3BQ9BZI7 483 aaKnown RBP19.73■□□□□ 0.75
EPHB4-204ENST00000477446 SH2D4AQ9H788 454 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 GPHNQ9NQX3 736 aaPredicted RBP19.73■□□□□ 0.75
EPHB4-204ENST00000477446 EMILIN3Q9NT22 766 aa19.73■□□□□ 0.75
EPHB4-204ENST00000477446 GOLGA6L22H0YM25 854 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
EPHB4-204ENST00000477446 CETPP11597 493 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 USP14P54578 494 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 KIF23Q02241 960 aaPredicted RBP19.72■□□□□ 0.75
EPHB4-204ENST00000477446 MOGSQ13724 837 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
EPHB4-204ENST00000477446 TMEM67Q5HYA8 995 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 TMX3Q96JJ7 454 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 TMEM87BQ96K49 555 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 SENP2Q9HC62 589 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 CYP46A1Q9Y6A2 500 aa19.72■□□□□ 0.75
EPHB4-204ENST00000477446 LOC285556D6RIA3 1793 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 CCL15-CCL14A0A0B4J2E2 113 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 MANSC4A6NHS7 340 aaPredicted RBP19.71■□□□□ 0.75
EPHB4-204ENST00000477446 SH2B2O14492 632 aaPredicted RBP19.71■□□□□ 0.75
EPHB4-204ENST00000477446 WTAPQ15007 396 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 CCL15Q16663 113 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 KIAA1755Q5JYT7 1200 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 IFIT1BQ5T764 474 aaKnown RBP19.71■□□□□ 0.75
EPHB4-204ENST00000477446 VCPKMTQ9H867 229 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 LY9Q9HBG7 655 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 SYNPO2Q9UMS6 1093 aa19.71■□□□□ 0.75
EPHB4-204ENST00000477446 GADL1Q6ZQY3 521 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 BRI3BPQ8WY22 251 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 GOPCQ9HD26 462 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 TESPA1A2RU30 521 aaPredicted RBP19.7■□□□□ 0.74
EPHB4-204ENST00000477446 F5H6K3 240 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 RAD21O60216 631 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 KLRC3Q07444 240 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 FASTKD5Q7L8L6 764 aaKnown RBP19.7■□□□□ 0.74
EPHB4-204ENST00000477446 SPICE1Q8N0Z3 855 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 PROCA1Q8NCQ7 364 aaPredicted RBP19.7■□□□□ 0.74
EPHB4-204ENST00000477446 GMCL1P1Q8NEA9 526 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 C12orf42Q96LP6 360 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 PTPN18Q99952 460 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 KAT14Q9H8E8 782 aa19.7■□□□□ 0.74
EPHB4-204ENST00000477446 MAP2K2P36507 400 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 LIFRP42702 1097 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 INHBEP58166 350 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 Q6ZUG5 572 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 DNAJC5GQ8N7S2 189 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 PNMA1Q8ND90 353 aa19.69■□□□□ 0.74
EPHB4-204ENST00000477446 THSD7BQ9C0I4 1608 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 TRAK2O60296 914 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 NDUFB10O96000 172 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 VCAM1P19320 739 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 TM4SF4P48230 202 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 SREBF2Q12772 1141 aa19.68■□□□□ 0.74
EPHB4-204ENST00000477446 TREML2Q5T2D2 321 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms