RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 AOX1Q06278 1338 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
BRCA1-214ENST00000477152 MYH2Q9UKX2 1941 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 FCGRTP55899 365 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 TCP10Q12799 353 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 NCOA4Q13772 614 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 MVPQ14764 893 aaKnown RBP8.95□□□□□ -0.98
BRCA1-214ENST00000477152 GORABQ5T7V8 394 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 CDC42EP5Q6NZY7 148 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 MIGA2Q7L4E1 593 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 ARHGAP45Q92619 1136 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 SIL1Q9H173 461 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 ZNF112Q9UJU3 913 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 DAGLAQ9Y4D2 1042 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 PTCH2Q9Y6C5 1203 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 DOCK2Q92608 1830 aa8.94□□□□□ -0.98
BRCA1-214ENST00000477152 PDHXO00330 501 aa8.94□□□□□ -0.98
BRCA1-214ENST00000477152 RFX5P48382 616 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-214ENST00000477152 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-214ENST00000477152 COPRSQ9NQ92 184 aa8.94□□□□□ -0.98
BRCA1-214ENST00000477152 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-214ENST00000477152 KCNH4Q9UQ05 1017 aa8.94□□□□□ -0.98
BRCA1-214ENST00000477152 IGSF3O75054 1194 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 EN2P19622 333 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-214ENST00000477152 PSMC4P43686 418 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 PABPC4Q13310 644 aaKnown RBP eCLIP8.93□□□□□ -0.98
BRCA1-214ENST00000477152 GRIK5Q16478 980 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 C17orf99Q6UX52 265 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 ATG9AQ7Z3C6 839 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 SCYL3Q8IZE3 742 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 HTATIP2Q9BUP3 242 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 IDI2Q9BXS1 227 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 VRTNQ9H8Y1 702 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 NOB1Q9ULX3 412 aaKnown RBP8.93□□□□□ -0.98
BRCA1-214ENST00000477152 SLC45A1Q9Y2W3 748 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 PLPP7Q8NBV4 271 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 SRRDQ9UH36 339 aa8.93□□□□□ -0.98
BRCA1-214ENST00000477152 CTNND1O60716 968 aaKnown RBP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 PRDX5P30044 214 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 INPP5BP32019 993 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 GRK4P32298 578 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 CRTC2Q53ET0 693 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 PPP1R18Q6NYC8 613 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 BPHLQ86WA6 291 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 MYPNQ86TC9 1320 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 MGAMO43451 1857 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 UQCRFS1P1P0C7P4 283 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 RGS3P49796 1198 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 SKOR1P84550 965 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 G3BP1Q13283 466 aaKnown RBP eCLIP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 HABP4Q5JVS0 413 aaKnown RBP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 SMCR8Q8TEV9 937 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-214ENST00000477152 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 CPA4Q9UI42 421 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 ZMIZ1Q9ULJ6 1067 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 ZHX2Q9Y6X8 837 aa8.92□□□□□ -0.98
BRCA1-214ENST00000477152 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-214ENST00000477152 SRGAP3O43295 1099 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 ATG7O95352 703 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 BAG3O95817 575 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 PHKA1P46020 1223 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 TRIM32Q13049 653 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 GADL1Q6ZQY3 521 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 COA7Q96BR5 231 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 NEUROD6Q96NK8 337 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 OSBPL5Q9H0X9 879 aaPredicted RBP8.91□□□□□ -0.98
BRCA1-214ENST00000477152 AS3MTQ9HBK9 375 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 NR2E3Q9Y5X4 410 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 GAKO14976 1311 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 DOCK1Q14185 1865 aa8.91□□□□□ -0.98
BRCA1-214ENST00000477152 A0A0G2JLL6 359 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-214ENST00000477152 A0A1B0GUL7 405 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 CCER2I3L3R5 266 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 GNAI2P04899 355 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 BTDP43251 543 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 RAB15P59190 212 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 PRRT2Q7Z6L0 340 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-214ENST00000477152 TRMT2AQ8IZ69 625 aaKnown RBP8.9□□□□□ -0.98
BRCA1-214ENST00000477152 SH3TC2Q8TF17 1288 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 DPF3Q92784 378 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 MROH7-TTC4A0A0A0MT08 1334 aa8.9□□□□□ -0.98
BRCA1-214ENST00000477152 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
BRCA1-214ENST00000477152 GJB1P08034 283 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 PTPRAP18433 802 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 GCLCP48506 637 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-214ENST00000477152 NFIAQ12857 509 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 PICALMQ13492 652 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 CCDC158Q5M9N0 1113 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 TRAF7Q6Q0C0 670 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 CERS3Q8IU89 383 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 XAGE2Q96GT9 111 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 RNF208Q9H0X6 261 aa8.9□□□□□ -0.99
BRCA1-214ENST00000477152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.9□□□□□ -0.99
BRCA1-214ENST00000477152 GPR75-ASB3A0A0A6YYF3 556 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 TNPO2O14787 897 aaKnown RBP8.89□□□□□ -0.99
BRCA1-214ENST00000477152 MYCP01106 439 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms