RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 NEK2P51955 445 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 EVCP57679 992 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 PDE4BQ07343 736 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 IFFO1Q0D2I5 559 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 RCN1Q15293 331 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 LRRFIP1Q32MZ4 808 aaKnown RBP4.66□□□□□ -1.66
CD55-208ENST00000476590 CCDC40Q4G0X9 1142 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 LCA5Q86VQ0 697 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 PLA2G4DQ86XP0 818 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 LRRC8AQ8IWT6 810 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 LRRN4CLQ8ND94 238 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 USP33Q8TEY7 942 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 CTNNBL1Q8WYA6 563 aaPredicted RBP4.66□□□□□ -1.66
CD55-208ENST00000476590 RBM33Q96EV2 1170 aaKnown RBP4.66□□□□□ -1.66
CD55-208ENST00000476590 ZNF512BQ96KM6 892 aaPredicted RBP4.66□□□□□ -1.66
CD55-208ENST00000476590 MKS1Q9NXB0 559 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 CROTQ9UKG9 612 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 PAIP2BQ9ULR5 123 aaKnown RBP4.66□□□□□ -1.66
CD55-208ENST00000476590 TIAM1Q13009 1591 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 PTPN23Q9H3S7 1636 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 PARD3Q8TEW0 1356 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 ABCA10Q8WWZ4 1543 aa4.66□□□□□ -1.66
CD55-208ENST00000476590 HECW1Q76N89 1606 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 TMEM232C9JQI7 657 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 SHOX2O60902 331 aaPredicted RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 TRIM37O94972 964 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 PENKP01210 267 aaPredicted RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 CCDC192P0DO97 292 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 DNAJA1P31689 397 aaKnown RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 CLK2P49760 499 aaKnown RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 SLFN5Q08AF3 891 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 CBLBQ13191 982 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 VPS53Q5VIR6 699 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 GALNT17Q6IS24 598 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 YTHDF3Q7Z739 585 aaKnown RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 LRRC49Q8IUZ0 686 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 CCAR1Q8IX12 1150 aaKnown RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 ZBTB8BQ8NAP8 495 aaPredicted RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 TMEM87AQ8NBN3 555 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 RABGGTAQ92696 567 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 CLIC6Q96NY7 704 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 SLC39A3Q9BRY0 314 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 LRRCC1Q9C099 1032 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 GBP3Q9H0R5 595 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 VCPKMTQ9H867 229 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 FAM204AQ9H8W3 233 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 CHST12Q9NRB3 414 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 NLRP2Q9NX02 1062 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 LIMD1Q9UGP4 676 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 HOOK1Q9UJC3 728 aaKnown RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 TMED5Q9Y3A6 229 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 ZNF521Q96K83 1311 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 ERCC6Q03468 1493 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 RAPGEF2Q9Y4G8 1499 aa4.65□□□□□ -1.66
CD55-208ENST00000476590 PRDM15P57071 1507 aaPredicted RBP4.65□□□□□ -1.66
CD55-208ENST00000476590 GOLGA8AA7E2F4 631 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 MEFVO15553 781 aaPredicted RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 PPP1R12BO60237 982 aaPredicted RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 GPR37L1O60883 481 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 SMIM24O75264 130 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 NR1I2O75469 434 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 IDO1P14902 403 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 PHEXP78562 749 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 EIF2B5Q13144 721 aaKnown RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 DRP2Q13474 957 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 SMUG1Q53HV7 270 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 RC3H1Q5TC82 1133 aaKnown RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 ATF7IPQ6VMQ6 1270 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 BICDL1Q6ZP65 573 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 NANOGNBQ7Z5D8 188 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 SLC43A3Q8NBI5 491 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 VPS37AQ8NEZ2 397 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 PPP1R14BQ96C90 147 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 ACSBG1Q96GR2 724 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 DHTKD1Q96HY7 919 aaPredicted RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 SCYL1Q96KG9 808 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 FAM161BQ96MY7 647 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 NEUROD6Q96NK8 337 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 SENP7Q9BQF6 1050 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 OSBPL10Q9BXB5 764 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 CENPHQ9H3R5 247 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 NRDE2Q9H7Z3 1164 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 PCDH18Q9HCL0 1135 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 HELLSQ9NRZ9 838 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 AATFQ9NY61 560 aaKnown RBP eCLIP4.65□□□□□ -1.67
CD55-208ENST00000476590 MYO1AQ9UBC5 1043 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 TPCN1Q9ULQ1 816 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 ATP6V0A2Q9Y487 856 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 PCDHB15Q9Y5E8 787 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 SPO11Q9Y5K1 396 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 MAFBQ9Y5Q3 323 aaPredicted RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 BZW2Q9Y6E2 419 aaKnown RBP4.65□□□□□ -1.67
CD55-208ENST00000476590 ANKRD30BQ9BXX2 1392 aa4.65□□□□□ -1.67
CD55-208ENST00000476590 GOLGA6L7A0A1B0GV03 622 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 A6NHS1 94 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 PRC1O43663 620 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 LINGO3P0C6S8 592 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 FOSL1P15407 271 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ATP5JP18859 108 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms