RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 MKNK2Q9HBH9 465 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 LDHCP07864 332 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 PRR29P0C7W0 189 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 ATP1A3P13637 1013 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 ATP2B4P23634 1241 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 HSPA1LP34931 641 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 MYL5Q02045 173 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 SLC20A2Q08357 652 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 DGKHQ86XP1 1220 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 RBM17Q96I25 401 aaKnown RBP18.26■□□□□ 0.51
VARS2-207ENST00000476162 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
VARS2-207ENST00000476162 GGA1Q9UJY5 639 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 SKILP12757 684 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 KIF5BP33176 963 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 PLCD1P51178 756 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 MAPKAPK5Q8IW41 473 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 GRAMD1CQ8IYS0 662 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 SLC44A5Q8NCS7 719 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 USP17L3A6NCW0 530 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 USP17L4A6NCW7 530 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 ACTN4O43707 911 aaKnown RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 SLFN14P0C7P3 912 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 NLRP5P59047 1200 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 FANCCQ00597 558 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 ZNF174Q15697 407 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 USP17L1Q7RTZ2 530 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 OSBPL5Q9H0X9 879 aaPredicted RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 IMPACTQ9P2X3 320 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 MAN1B1Q9UKM7 699 aa18.25■□□□□ 0.51
VARS2-207ENST00000476162 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
VARS2-207ENST00000476162 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
VARS2-207ENST00000476162 GSDMDP57764 484 aa18.24■□□□□ 0.51
VARS2-207ENST00000476162 CCZ1BP86790 482 aa18.24■□□□□ 0.51
VARS2-207ENST00000476162 CCZ1P86791 482 aaPredicted RBP18.24■□□□□ 0.51
VARS2-207ENST00000476162 EPSTI1Q96J88 318 aa18.24■□□□□ 0.51
VARS2-207ENST00000476162 C16orf45Q96MC5 204 aaPredicted RBP18.24■□□□□ 0.51
VARS2-207ENST00000476162 UBR3Q6ZT12 1888 aa18.24■□□□□ 0.51
VARS2-207ENST00000476162 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
VARS2-207ENST00000476162 IL1R1P14778 569 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 BTDP43251 543 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 DDR1Q08345 913 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 TTC38Q5R3I4 469 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 NT5DC1Q5TFE4 455 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 TMC6Q7Z403 805 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 ZNF444Q8N0Y2 327 aaPredicted RBP18.23■□□□□ 0.51
VARS2-207ENST00000476162 STAG2Q8N3U4 1231 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 ANKS1AQ92625 1134 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 POLLQ9UGP5 575 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 ADAMTS3O15072 1205 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 BBOX1O75936 387 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 TSPY3P0CV98 308 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 TSPY8P0CW00 308 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 SARSP49591 514 aaKnown RBP18.23■□□□□ 0.51
VARS2-207ENST00000476162 SMARCE1Q969G3 411 aa18.23■□□□□ 0.51
VARS2-207ENST00000476162 QTRT2Q9H974 415 aaKnown RBP18.23■□□□□ 0.51
VARS2-207ENST00000476162 A0A087X0B3 334 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 TRIM37O94972 964 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 BMP15O95972 392 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 NT5C2P49902 561 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 KANK3Q6NY19 840 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 PIK3AP1Q6ZUJ8 805 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 DHX58Q96C10 678 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 FANCLQ9NW38 375 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 PTGDRQ13258 359 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 TPD52L1Q16890 204 aaPredicted RBP18.22■□□□□ 0.51
VARS2-207ENST00000476162 TBC1D16Q8TBP0 767 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 SYMPKQ92797 1274 aaKnown RBP18.22■□□□□ 0.51
VARS2-207ENST00000476162 FERMT2Q96AC1 680 aa18.22■□□□□ 0.51
VARS2-207ENST00000476162 GPR75-ASB3A0A0A6YYF3 556 aa18.21■□□□□ 0.51
VARS2-207ENST00000476162 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
VARS2-207ENST00000476162 MFSD14BQ5SR56 506 aa18.21■□□□□ 0.51
VARS2-207ENST00000476162 DPF2Q92785 391 aa18.21■□□□□ 0.51
VARS2-207ENST00000476162 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.5
VARS2-207ENST00000476162 SERPINC1P01008 464 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 RASA1P20936 1047 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 HOXA10P31260 410 aaPredicted RBP18.21■□□□□ 0.5
VARS2-207ENST00000476162 UBASH3AP57075 661 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 MORC3Q14149 939 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 GRM4Q14833 912 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 GPKOWQ92917 476 aaPredicted RBP eCLIP18.21■□□□□ 0.57e-6■■■■■ 33.4
VARS2-207ENST00000476162 TCP11L1Q9NUJ3 509 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 STX8Q9UNK0 236 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 MTMR7Q9Y216 660 aa18.21■□□□□ 0.5
VARS2-207ENST00000476162 VWA3AA6NCI4 1184 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 USP27XA6NNY8 438 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 TNNT1P13805 278 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 ATP2C1P98194 919 aaPredicted RBP18.2■□□□□ 0.5
VARS2-207ENST00000476162 CCDC178Q5BJE1 867 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 ARMCX5Q6P1M9 558 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 TEX11Q8IYF3 940 aa18.2■□□□□ 0.5
VARS2-207ENST00000476162 CERS3Q8IU89 383 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms