RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 FNDC3AQ9Y2H6 1198 aaKnown RBP5.49□□□□□ -1.53
VPS13D-206ENST00000476045 CACNA1FO60840 1977 aa5.49□□□□□ -1.53
VPS13D-206ENST00000476045 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 A0A0G2JLW4 131 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 BTBD11A6QL63 1104 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 H0YIN7 160 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 DLL1O00548 723 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 TM4SF5O14894 197 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 TOMM70O94826 608 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 RPLP1P05386 114 aaKnown RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 SNRPA1P09661 255 aaKnown RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 EIF2AK2P19525 551 aaKnown RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 PDE6BP35913 854 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 LMOD3Q0VAK6 560 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 FSTL1Q12841 308 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 COL13A1Q5TAT6 717 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 Q6ZS46 218 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 WFDC8Q8IUA0 241 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 MAP4K3Q8IVH8 894 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 DMRTC2Q8IXT2 367 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 C16orf71Q8IYS4 520 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 TTLL6Q8N841 843 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 BRIP1Q9BX63 1249 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 MRS2Q9HD23 443 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 ABI2Q9NYB9 513 aaPredicted RBP5.48□□□□□ -1.53
VPS13D-206ENST00000476045 LRRC37AA6NMS7 1700 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 RNF123Q5XPI4 1314 aa5.48□□□□□ -1.53
VPS13D-206ENST00000476045 NPHP1O15259 732 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 CAMTA2O94983 1202 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 SERPINB2P05120 415 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 H2AFB1P0C5Y9 115 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 H2AFB2P0C5Z0 115 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 LMNB1P20700 586 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 KCNA3P22001 575 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 CANXP27824 592 aaKnown RBP5.47□□□□□ -1.53
VPS13D-206ENST00000476045 DOC2BQ14184 412 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 RALBP1Q15311 655 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 C9orf131Q5VYM1 1079 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 ARHGAP27Q6ZUM4 889 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 SMIM5Q71RC9 77 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 IL17REQ8NFR9 667 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 GPR152Q8TDT2 470 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 NSUN5Q96P11 429 aaKnown RBP5.47□□□□□ -1.53
VPS13D-206ENST00000476045 BABAM1Q9NWV8 329 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 RNF181Q9P0P0 153 aa5.47□□□□□ -1.53
VPS13D-206ENST00000476045 MYH3P11055 1940 aa5.46□□□□□ -1.53
VPS13D-206ENST00000476045 DYRK3O43781 588 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 PDGFAP04085 211 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 MZF1P28698 734 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-206ENST00000476045 HYAL2Q12891 473 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 NFE2L2Q16236 605 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 STYK1Q6J9G0 422 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 PRR5LQ6MZQ0 368 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 IGF2-ASQ6U949 168 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 SHISA2Q6UWI4 295 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 HFE2Q6ZVN8 426 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 C2CD5Q86YS7 1000 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 CEP120Q8N960 986 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-206ENST00000476045 SETDB2Q96T68 719 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 ANP32EQ9BTT0 268 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 NYXQ9GZU5 481 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 TAOK3Q9H2K8 898 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 PRKRIP1Q9H875 184 aaPredicted RBP5.46□□□□□ -1.54
VPS13D-206ENST00000476045 WWC3Q9ULE0 1092 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 ADAMTSL1Q8N6G6 1762 aa5.46□□□□□ -1.54
VPS13D-206ENST00000476045 MYBBP1AQ9BQG0 1328 aaKnown RBP5.46□□□□□ -1.54
VPS13D-206ENST00000476045 TRPM7Q96QT4 1865 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 J3QW42 95 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 GHRHP01286 108 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 MPSTP25325 297 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 CHRNA5P30532 468 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 SCNN1AP37088 669 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 EIF1AXP47813 144 aaKnown RBP5.45□□□□□ -1.54
VPS13D-206ENST00000476045 SETDB1Q15047 1291 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 NOM1Q5C9Z4 860 aaKnown RBP5.45□□□□□ -1.54
VPS13D-206ENST00000476045 TBC1D9BQ66K14 1250 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 KIF6Q6ZMV9 814 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-206ENST00000476045 SMC1BQ8NDV3 1235 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 GTF3C2Q8WUA4 911 aaPredicted RBP5.45□□□□□ -1.54
VPS13D-206ENST00000476045 MASTLQ96GX5 879 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 PHACTR3Q96KR7 559 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 MUC3BQ9H195 1237 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 RBSNQ9H1K0 784 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 CHRDQ9H2X0 955 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 ELP3Q9H9T3 547 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 TMEM63CQ9P1W3 806 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 EGFL7Q9UHF1 273 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 THSD7BQ9C0I4 1608 aa5.45□□□□□ -1.54
VPS13D-206ENST00000476045 PSME4Q14997 1843 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 GLTPD2A6NH11 291 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 ERVV-1B6SEH8 477 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 NFKBIEO00221 500 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 SRGNP10124 158 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 NPR1P16066 1061 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 TAF7Q15545 349 aaPredicted RBP5.44□□□□□ -1.54
VPS13D-206ENST00000476045 CCDC93Q567U6 631 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 ALKBH2Q6NS38 261 aa5.44□□□□□ -1.54
VPS13D-206ENST00000476045 PRPF40BQ6NWY9 871 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms