RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SGPL1O95470 568 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 GUCY1A2P33402 732 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 TDO2P48775 406 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 CDK8P49336 464 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 FLT3LGP49771 235 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 ICA1Q05084 483 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L24Q0WX57 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 SMC5Q8IY18 1101 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 ACER1Q8TDN7 264 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 P2RX7Q99572 595 aaKnown RBP13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 CDH23Q9H251 3354 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 GSG1L2A8MUP6 293 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 AKR1B1P15121 316 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 PDE1AP54750 535 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 IRF5Q13568 498 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 SBK1Q52WX2 424 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 GPRC5AQ8NFJ5 357 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 PAGR1Q9BTK6 254 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 NACAP1Q9BZK3 213 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 LNPKQ9C0E8 428 aa13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 SUPT16HQ9Y5B9 1047 aaKnown RBP13.62□□□□□ -0.23
NUDCD3-206ENST00000475952 MUC3AQ02505 3323 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 MINDY4BA8MYZ0 360 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 ADCY3O60266 1144 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 APPP05067 770 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 ERVK-9P63128 1117 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 ERVK-24P63145 666 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 CATSPERGQ6ZRH7 1159 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 Q7L0L9 218 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 CCAR1Q8IX12 1150 aaKnown RBP13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 DEFB123Q8N688 67 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 PXYLP1Q8TE99 480 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 GDF15Q99988 308 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
NUDCD3-206ENST00000475952 PATL2C9JE40 543 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 SMIM22K7EJ46 135 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 INHAP05111 366 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 ELNP15502 786 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 BMP8BP34820 402 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 IFNL3Q8IZI9 196 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 LPAR1Q92633 364 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 SEC62Q99442 399 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 MKNK2Q9HBH9 465 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 TXNRD2Q9NNW7 524 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 STXBP5LQ9Y2K9 1186 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 TMX2Q9Y320 296 aa13.6□□□□□ -0.23
NUDCD3-206ENST00000475952 MYH6P13533 1939 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 MAPK4P31152 587 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 CCNA1P78396 465 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 LBX2Q6XYB7 198 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 DEFB118Q96PH6 123 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 TANGO6Q9C0B7 1094 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 CRISPLD2Q9H0B8 497 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 NAPBQ9H115 298 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 KANSL2Q9H9L4 492 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 RBPJLQ9UBG7 517 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 RABGAP1Q9Y3P9 1069 aa13.59□□□□□ -0.23
NUDCD3-206ENST00000475952 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 WDR46O15213 610 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 SLC3A2P08195 630 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 STK11IPQ8N1F8 1099 aa13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 PAWRQ96IZ0 340 aaKnown RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 COL25A1Q9BXS0 654 aaPredicted RBP13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 GOPCQ9HD26 462 aa13.58□□□□□ -0.24
NUDCD3-206ENST00000475952 IGHDP01880 384 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 HMGCRP04035 888 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 EEF2P13639 858 aaKnown RBP13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 CAPN2P17655 700 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 RASA1P20936 1047 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 NUCB1Q02818 461 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 PDE4BQ07343 736 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 COG2Q14746 738 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 LRIT3Q3SXY7 679 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 GPR142Q7Z601 462 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 C7orf61Q8IZ16 206 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 PORCNQ9H237 461 aa13.57□□□□□ -0.24
NUDCD3-206ENST00000475952 HELLSQ9NRZ9 838 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms