RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CLUAP1Q96AJ1 413 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
CALD1-217ENST00000475772 DBNDD2Q9BQY9 259 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.83□□□□□ -0.36
CALD1-217ENST00000475772 SLC24A3Q9HC58 644 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 HCSTQ9UBK5 93 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 STAP2Q9UGK3 403 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
CALD1-217ENST00000475772 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 HOXA7P31268 230 aaPredicted RBP12.82□□□□□ -0.36
CALD1-217ENST00000475772 BACE1P56817 501 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 ATP8B2P98198 1209 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 TNNI3KQ59H18 835 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 TRIB2Q92519 343 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 TSR3Q9UJK0 312 aaKnown RBP12.82□□□□□ -0.36
CALD1-217ENST00000475772 FPGT-TNNI3KV9GXZ4 949 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 RPTORQ8N122 1335 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 MYH1P12882 1939 aa12.82□□□□□ -0.36
CALD1-217ENST00000475772 HMGCRP04035 888 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 MTMR2Q13614 643 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
CALD1-217ENST00000475772 FOXP4Q8IVH2 680 aaPredicted RBP12.81□□□□□ -0.36
CALD1-217ENST00000475772 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 TMEM57Q8N5G2 664 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
CALD1-217ENST00000475772 GDF15Q99988 308 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 DHX36Q9H2U1 1008 aaKnown RBP12.81□□□□□ -0.36
CALD1-217ENST00000475772 RBPJLQ9UBG7 517 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
CALD1-217ENST00000475772 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
CALD1-217ENST00000475772 IPO8O15397 1037 aaKnown RBP12.8□□□□□ -0.36
CALD1-217ENST00000475772 GDF11O95390 407 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 CYP2B6P20813 491 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 ZAP70P43403 619 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
CALD1-217ENST00000475772 PABPC4Q13310 644 aaKnown RBP eCLIP12.8□□□□□ -0.36
CALD1-217ENST00000475772 MAP3K21Q5TCX8 1036 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 NECAB2Q7Z6G3 386 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 USP6NLQ92738 828 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
CALD1-217ENST00000475772 AS3MTQ9HBK9 375 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 PIH1D3Q9NQM4 214 aaKnown RBP12.8□□□□□ -0.36
CALD1-217ENST00000475772 OGDHLQ9ULD0 1010 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 FLT1P17948 1338 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 A0A0C4DFX4 3053 aa12.8□□□□□ -0.36
CALD1-217ENST00000475772 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
CALD1-217ENST00000475772 DNAH12Q6ZR08 3092 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 C19orf81C9J6K1 198 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 BAG3O95817 575 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 ASNSP08243 561 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 ANKLE1Q8NAG6 615 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
CALD1-217ENST00000475772 TLR7Q9NYK1 1049 aaKnown RBP12.79□□□□□ -0.36
CALD1-217ENST00000475772 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
CALD1-217ENST00000475772 A0A1W2PPC1 479 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 USP17L10C9JJH3 530 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 BMP8BP34820 402 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 HERVK_113P62684 666 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 PORCNQ9H237 461 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 C1orf115Q9H7X2 142 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 SAP30BPQ9UHR5 308 aaKnown RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 ZBTB21Q9ULJ3 1066 aa12.78□□□□□ -0.36
CALD1-217ENST00000475772 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
CALD1-217ENST00000475772 TRIM66O15016 1216 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 CNMDO75829 334 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 XRCC5P13010 732 aaKnown RBP12.77□□□□□ -0.37
CALD1-217ENST00000475772 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
CALD1-217ENST00000475772 CACNB2Q08289 660 aaPredicted RBP12.77□□□□□ -0.37
CALD1-217ENST00000475772 CCL14Q16627 93 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 MORN1Q5T089 497 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 NUDT12Q9BQG2 462 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 ZMYND8Q9ULU4 1186 aaPredicted RBP12.77□□□□□ -0.37
CALD1-217ENST00000475772 NDUFB9Q9Y6M9 179 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 PFASO15067 1338 aa12.77□□□□□ -0.37
CALD1-217ENST00000475772 RNF40O75150 1001 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 RLBP1P12271 317 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 SYN1P17600 705 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 ERVK-9P63128 1117 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 ERVK-24P63145 666 aa12.76□□□□□ -0.37
CALD1-217ENST00000475772 AMHR2Q16671 573 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms