RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 COG2Q14746 738 aa24.84■■□□□ 1.57
VPS36-203ENST00000475375 AACSQ86V21 672 aa24.84■■□□□ 1.57
VPS36-203ENST00000475375 STRNO43815 780 aa24.83■■□□□ 1.57
VPS36-203ENST00000475375 PLS1Q14651 629 aa24.83■■□□□ 1.57
VPS36-203ENST00000475375 OLFML2BQ68BL8 750 aa24.83■■□□□ 1.57
VPS36-203ENST00000475375 TMED8Q6PL24 325 aaPredicted RBP24.83■■□□□ 1.57
VPS36-203ENST00000475375 RIOK1Q9BRS2 568 aaKnown RBP24.83■■□□□ 1.57
VPS36-203ENST00000475375 CRNKL1Q9BZJ0 848 aaKnown RBP24.83■■□□□ 1.57
VPS36-203ENST00000475375 SPATC1LQ9H0A9 340 aa24.83■■□□□ 1.57
VPS36-203ENST00000475375 MCM9Q9NXL9 1143 aa24.83■■□□□ 1.57
VPS36-203ENST00000475375 ERCC3P19447 782 aa24.82■■□□□ 1.56
VPS36-203ENST00000475375 SLC39A5Q6ZMH5 540 aa24.82■■□□□ 1.56
VPS36-203ENST00000475375 SLC5A4Q9NY91 659 aa24.82■■□□□ 1.56
VPS36-203ENST00000475375 A0A1W2PRG0 241 aa24.81■■□□□ 1.56
VPS36-203ENST00000475375 SHHQ15465 462 aa24.81■■□□□ 1.56
VPS36-203ENST00000475375 SAMD1Q6SPF0 538 aaPredicted RBP24.81■■□□□ 1.56
VPS36-203ENST00000475375 CCER2I3L3R5 266 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 SEPT4O43236 478 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 TRIM60Q495X7 471 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 NCAPG2Q86XI2 1143 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 SHCBP1Q8NEM2 672 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 EXOC6BQ9Y2D4 811 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 EYSQ5T1H1 3165 aa24.8■■□□□ 1.56
VPS36-203ENST00000475375 COBLO75128 1261 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 EVX2Q03828 476 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 GABPAQ06546 454 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 TTF1Q15361 905 aaPredicted RBP24.79■■□□□ 1.56
VPS36-203ENST00000475375 PRAMEF19Q5SWL8 479 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 SLC9C2Q5TAH2 1124 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 ERC1Q8IUD2 1116 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 FERMT2Q96AC1 680 aa24.79■■□□□ 1.56
VPS36-203ENST00000475375 FLOT1O75955 427 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 IGHA2P01877 340 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 PDE6AP16499 860 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 ADCYAP1R1P41586 468 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 C9orf50Q5SZB4 431 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 MB21D1Q8N884 522 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 BADQ92934 168 aa24.78■■□□□ 1.56
VPS36-203ENST00000475375 NAV1Q8NEY1 1877 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 TMEM179Q6ZVK1 233 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 SPICE1Q8N0Z3 855 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 SDR42E1Q8WUS8 393 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 MROH8Q9H579 483 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 IL1RAPL2Q9NP60 686 aa24.77■■□□□ 1.56
VPS36-203ENST00000475375 DSG3P32926 999 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 LRRC41Q15345 812 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 CEP85Q6P2H3 762 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 SLC44A5Q8NCS7 719 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 ATG4CQ96DT6 458 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 DNAJC2Q99543 621 aaKnown RBP24.76■■□□□ 1.55
VPS36-203ENST00000475375 CDX2Q99626 313 aaPredicted RBP24.76■■□□□ 1.55
VPS36-203ENST00000475375 BCL11AQ9H165 835 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 ARHGEF10LQ9HCE6 1279 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 LTBP2Q14767 1821 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 ZNF236Q9UL36 1845 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 VCANP13611 3396 aa24.76■■□□□ 1.55
VPS36-203ENST00000475375 CYP2D6P10635 497 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 RLBP1P12271 317 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 FCER1AP12319 257 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 KIAA1755Q5JYT7 1200 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 CLEC10AQ8IUN9 316 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 MAFAQ8NHW3 353 aaPredicted RBP24.75■■□□□ 1.55
VPS36-203ENST00000475375 SH2D4AQ9H788 454 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 PDLIM7Q9NR12 457 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 ZNF532Q9HCE3 1301 aa24.75■■□□□ 1.55
VPS36-203ENST00000475375 RLFQ13129 1914 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 ICA1Q05084 483 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 FAM47AQ5JRC9 791 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 ABRAQ8N0Z2 381 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 DYNLL2Q96FJ2 89 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 MAML3Q96JK9 1138 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 SEMA6BQ9H3T3 888 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 DCP1AQ9NPI6 582 aaPredicted RBP24.74■■□□□ 1.55
VPS36-203ENST00000475375 SWAP70Q9UH65 585 aa24.74■■□□□ 1.55
VPS36-203ENST00000475375 GOLIM4O00461 696 aa24.73■■□□□ 1.55
VPS36-203ENST00000475375 SNX17Q15036 470 aa24.73■■□□□ 1.55
VPS36-203ENST00000475375 SH3RF1Q7Z6J0 888 aa24.73■■□□□ 1.55
VPS36-203ENST00000475375 LCORLQ8N3X6 602 aa24.73■■□□□ 1.55
VPS36-203ENST00000475375 PRUNE2Q8WUY3 3088 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 TRIM43BA6NCK2 446 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 APBB1O00213 710 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 HSP90AB4PQ58FF6 505 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 TRIM43Q96BQ3 446 aaPredicted RBP24.72■■□□□ 1.55
VPS36-203ENST00000475375 ARMT1Q9H993 441 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 XPNPEP3Q9NQH7 507 aa24.72■■□□□ 1.55
VPS36-203ENST00000475375 RARBP10826 455 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 AKR1B1P15121 316 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 SMAD3P84022 425 aaKnown RBP24.71■■□□□ 1.55
VPS36-203ENST00000475375 TLE2Q04725 743 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 MYLIPQ8WY64 445 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 MMP19Q99542 508 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 VCPKMTQ9H867 229 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 TMX2Q9Y320 296 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 A0A0G2JMZ2 1700 aa24.71■■□□□ 1.55
VPS36-203ENST00000475375 SLC25A27O95847 323 aa24.7■■□□□ 1.54
VPS36-203ENST00000475375 RHPN1Q8TCX5 695 aa24.7■■□□□ 1.54
VPS36-203ENST00000475375 TCRBV5S4A2TA0A5A2 114 aa24.69■■□□□ 1.54
VPS36-203ENST00000475375 WDR46O15213 610 aaKnown RBP24.69■■□□□ 1.54
VPS36-203ENST00000475375 RAD21O60216 631 aa24.69■■□□□ 1.54
VPS36-203ENST00000475375 PGK2P07205 417 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms