RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
SRM-204ENST00000475189 ZNF213O14771 459 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 GCLCP48506 637 aaPredicted RBP19.23■□□□□ 0.67
SRM-204ENST00000475189 PTH1RQ03431 593 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 AKNAD1Q5T1N1 836 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 TBC1D10CQ8IV04 446 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 STAG1Q8WVM7 1258 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 ARHGAP39Q9C0H5 1083 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 RPAP3Q9H6T3 665 aaPredicted RBP19.23■□□□□ 0.67
SRM-204ENST00000475189 EFCC1Q9HA90 598 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 CLIP2Q9UDT6 1046 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 CTNNA3Q9UI47 895 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 TRIM17Q9Y577 477 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 PARP14Q460N5 1801 aa19.23■□□□□ 0.67
SRM-204ENST00000475189 TSPY2A6NKD2 308 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 RANBP6O60518 1105 aaKnown RBP19.22■□□□□ 0.67
SRM-204ENST00000475189 CTGFP29279 349 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 HERVK_113P62684 666 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 KIF22Q14807 665 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 LPAR1Q92633 364 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 MKL1Q969V6 931 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 TOMM22Q9NS69 142 aa19.22■□□□□ 0.67
SRM-204ENST00000475189 TTLL1O95922 423 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 PCP11498 1178 aaKnown RBP19.21■□□□□ 0.67
SRM-204ENST00000475189 PKN2Q16513 984 aaKnown RBP19.21■□□□□ 0.67
SRM-204ENST00000475189 IMMTQ16891 758 aaKnown RBP19.21■□□□□ 0.67
SRM-204ENST00000475189 FAM110CQ1W6H9 321 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 RRP12Q5JTH9 1297 aaKnown RBP19.21■□□□□ 0.67
SRM-204ENST00000475189 POTEEQ6S8J3 1075 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 GOPCQ9HD26 462 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 IL17RBQ9NRM6 502 aa19.21■□□□□ 0.67
SRM-204ENST00000475189 ECM2O94769 699 aaPredicted RBP19.2■□□□□ 0.66
SRM-204ENST00000475189 PSMC4P43686 418 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 ARHGEF6Q15052 776 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 NKX2-3Q8TAU0 364 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 TRIM47Q96LD4 638 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
SRM-204ENST00000475189 RBPJLQ9UBG7 517 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 MORF4L1Q9UBU8 362 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 NEDD4P46934 1319 aa19.2■□□□□ 0.66
SRM-204ENST00000475189 WDR46O15213 610 aaKnown RBP19.19■□□□□ 0.66
SRM-204ENST00000475189 NMT2O60551 498 aa19.19■□□□□ 0.66
SRM-204ENST00000475189 PEX10O60683 326 aa19.19■□□□□ 0.66
SRM-204ENST00000475189 GTF3C2Q8WUA4 911 aaPredicted RBP19.19■□□□□ 0.66
SRM-204ENST00000475189 MAP4K1Q92918 833 aa19.19■□□□□ 0.66
SRM-204ENST00000475189 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
SRM-204ENST00000475189 TXNRD2Q9NNW7 524 aa19.19■□□□□ 0.66
SRM-204ENST00000475189 SPDYE16A6NNV3 312 aaPredicted RBP19.18■□□□□ 0.66
SRM-204ENST00000475189 F5H6K3 240 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 RAD21O60216 631 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 NOVP48745 357 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 KLRC3Q07444 240 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 COG2Q14746 738 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 PPP4R3BQ5MIZ7 849 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 FBXO46Q6PJ61 603 aaPredicted RBP19.18■□□□□ 0.66
SRM-204ENST00000475189 LBX2Q6XYB7 198 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 ABHD8Q96I13 439 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 TCP11L1Q9NUJ3 509 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 SYNPO2Q9UMS6 1093 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 PTPN22Q9Y2R2 807 aa19.18■□□□□ 0.66
SRM-204ENST00000475189 U3KPZ7 1027 aaPredicted RBP19.18■□□□□ 0.66
SRM-204ENST00000475189 COL11A1P12107 1806 aaPredicted RBP19.17■□□□□ 0.66
SRM-204ENST00000475189 CDC45O75419 566 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 CNMDO75829 334 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 FMNL1O95466 1100 aaPredicted RBP19.17■□□□□ 0.66
SRM-204ENST00000475189 NDUFB10O96000 172 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 GNRH1P01148 92 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 Q3C1V9 767 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 FAM83BQ5T0W9 1011 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 LRRC47Q8N1G4 583 aaKnown RBP19.17■□□□□ 0.66
SRM-204ENST00000475189 LSG1Q9H089 658 aaKnown RBP19.17■□□□□ 0.66
SRM-204ENST00000475189 HOXC10Q9NYD6 342 aa19.17■□□□□ 0.66
SRM-204ENST00000475189 CYP21A2P08686 494 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 DSG3P32926 999 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 FCGRTP55899 365 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 KIAA1211Q6ZU35 1233 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 GMCL1P1Q8NEA9 526 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 GPRC5AQ8NFJ5 357 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 ESR2Q92731 530 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 NUP88Q99567 741 aaPredicted RBP19.16■□□□□ 0.66
SRM-204ENST00000475189 PAGR1Q9BTK6 254 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 RABGAP1Q9Y3P9 1069 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 A0A0G2JMZ2 1700 aa19.16■□□□□ 0.66
SRM-204ENST00000475189 B4E1Z4 1266 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 FLOT1O75955 427 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 NT5C2P49902 561 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 ERVK-9P63128 1117 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 ERVK-24P63145 666 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 FBXO28Q9NVF7 368 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 BTBD7Q9P203 1132 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 SRRDQ9UH36 339 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 HPS5Q9UPZ3 1129 aa19.15■□□□□ 0.66
SRM-204ENST00000475189 RBM8AQ9Y5S9 174 aaKnown RBP19.15■□□□□ 0.66
SRM-204ENST00000475189 KDM4AO75164 1064 aa19.14■□□□□ 0.65
SRM-204ENST00000475189 HOXD10P28358 340 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms