RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 GPR142Q7Z601 462 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 PLEKHM2Q8IWE5 1019 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 CCAR1Q8IX12 1150 aaKnown RBP14.2□□□□□ -0.14
CLIP2-204ENST00000474962 TRIB2Q92519 343 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 USP6NLQ92738 828 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 NUDT12Q9BQG2 462 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 BTBD7Q9P203 1132 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 RABGAP1Q9Y3P9 1069 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 SLC4A4Q9Y6R1 1079 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 TRIM6-TRIM34B2RNG4 842 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 AKR1B1P15121 316 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 CDK8P49336 464 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 MORN1Q5T089 497 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 CTR9Q6PD62 1173 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 PLEKHH3Q7Z736 793 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 PI4K2BQ8TCG2 481 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLIP2-204ENST00000474962 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
CLIP2-204ENST00000474962 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
CLIP2-204ENST00000474962 XRCC5P13010 732 aaKnown RBP14.18□□□□□ -0.14
CLIP2-204ENST00000474962 CCL14Q16627 93 aa14.18□□□□□ -0.14
CLIP2-204ENST00000474962 TMEM179Q6ZVK1 233 aa14.18□□□□□ -0.14
CLIP2-204ENST00000474962 GTF3C2Q8WUA4 911 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-204ENST00000474962 RILPL2Q969X0 211 aa14.18□□□□□ -0.14
CLIP2-204ENST00000474962 PAWRQ96IZ0 340 aaKnown RBP14.18□□□□□ -0.14
CLIP2-204ENST00000474962 STRBPQ96SI9 672 aaKnown RBP14.18□□□□□ -0.14
CLIP2-204ENST00000474962 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
CLIP2-204ENST00000474962 HMX1Q9NP08 348 aaPredicted RBP14.18□□□□□ -0.14
CLIP2-204ENST00000474962 SALL3Q9BXA9 1300 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-204ENST00000474962 PDE4AP27815 886 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
CLIP2-204ENST00000474962 COG2Q14746 738 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 MAP3K21Q5TCX8 1036 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 WDR78Q5VTH9 848 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 DIS3LQ8TF46 1054 aaKnown RBP14.17□□□□□ -0.14
CLIP2-204ENST00000474962 OSBP2Q969R2 916 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 EVI5LQ96CN4 794 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 FSD1Q9BTV5 496 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
CLIP2-204ENST00000474962 GSG1L2A8MUP6 293 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 RNF113AO15541 343 aaKnown RBP14.16□□□□□ -0.14
CLIP2-204ENST00000474962 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
CLIP2-204ENST00000474962 RGS2P41220 211 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 CCNA1P78396 465 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 LBX2Q6XYB7 198 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 C16orf86Q6ZW13 317 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 KBTBD3Q8NAB2 608 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
CLIP2-204ENST00000474962 CWC22Q9HCG8 908 aaKnown RBP14.16□□□□□ -0.14
CLIP2-204ENST00000474962 PLXNB2O15031 1838 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.14
CLIP2-204ENST00000474962 PTPREP23469 700 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
CLIP2-204ENST00000474962 ATP2B2Q01814 1243 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 CCDC17Q96LX7 622 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 FLRT1Q9NZU1 646 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 GTF3C3Q9Y5Q9 886 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 TRIOBPQ9H2D6 2365 aa14.15□□□□□ -0.14
CLIP2-204ENST00000474962 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 MINDY4BA8MYZ0 360 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 EVI5O60447 810 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 ZFYP08048 801 aaPredicted RBP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 CAPN2P17655 700 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 CCND3P30281 292 aaPredicted RBP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 ICA1Q05084 483 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 MAP2K5Q13163 448 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 NECAB2Q7Z6G3 386 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 AMOTL1Q8IY63 956 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 TRMT44Q8IYL2 757 aaKnown RBP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 MOV10L1Q9BXT6 1211 aaKnown RBP14.14□□□□□ -0.15
CLIP2-204ENST00000474962 ARHGEF10LQ9HCE6 1279 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 NR2E3Q9Y5X4 410 aa14.14□□□□□ -0.15
CLIP2-204ENST00000474962 BAZ2AQ9UIF9 1905 aaKnown RBP14.13□□□□□ -0.15
CLIP2-204ENST00000474962 DDX60LQ5H9U9 1706 aaKnown RBP14.13□□□□□ -0.15
CLIP2-204ENST00000474962 NAV1Q8NEY1 1877 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 M0R2C6 588 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 DSG3P32926 999 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
CLIP2-204ENST00000474962 TTC22Q5TAA0 569 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 LHX8Q68G74 356 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 APPBP2Q92624 585 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 SEC62Q99442 399 aaKnown RBP14.13□□□□□ -0.15
CLIP2-204ENST00000474962 APBA2Q99767 749 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 VCPKMTQ9H867 229 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 KANSL2Q9H9L4 492 aa14.13□□□□□ -0.15
CLIP2-204ENST00000474962 RBM27Q9P2N5 1060 aaKnown RBP14.13□□□□□ -0.15
CLIP2-204ENST00000474962 OGDHLQ9ULD0 1010 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms