RNA–Protein interactions for RNA: ENST00000474904.5

GPATCH4-206, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-206ENST00000474904 NEFLP07196 543 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 IRX3P78415 501 aaPredicted RBP12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 PPP4R3BQ5MIZ7 849 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 RBPJLQ9UBG7 517 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 TACC3Q9Y6A5 838 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
GPATCH4-206ENST00000474904 ZSWIM8A7E2V4 1837 aa12.83□□□□□ -0.35
GPATCH4-206ENST00000474904 MKI67P46013 3256 aaKnown RBP12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 WDR46O15213 610 aaKnown RBP12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 PRDM1O75626 825 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 HOXD10P28358 340 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 PSMC4P43686 418 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 ARHGAP39Q9C0H5 1083 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 IL25Q9H293 177 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 TCP11L1Q9NUJ3 509 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 HOXC10Q9NYD6 342 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 SRRDQ9UH36 339 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 HPS5Q9UPZ3 1129 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
GPATCH4-206ENST00000474904 SGSM2O43147 1006 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 TTLL1O95922 423 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 FCGRTP55899 365 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 TFAP4Q01664 338 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 COG2Q14746 738 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 CLEC10AQ8IUN9 316 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 RPAP3Q9H6T3 665 aaPredicted RBP12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 CTNNA3Q9UI47 895 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 A0A0G2JMZ2 1700 aa12.82□□□□□ -0.36
GPATCH4-206ENST00000474904 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 ZNF213O14771 459 aa12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 GPRC5AQ8NFJ5 357 aa12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 RNF41Q9H4P4 317 aaPredicted RBP12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 TXNRD2Q9NNW7 524 aa12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
GPATCH4-206ENST00000474904 F5H6K3 240 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 CNMDO75829 334 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 FMNL1O95466 1100 aaPredicted RBP12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 DSG3P32926 999 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 ERVK-9P63128 1117 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 ERVK-24P63145 666 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 KLRC3Q07444 240 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 IRF5Q13568 498 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 Q3C1V9 767 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 FAM47AQ5JRC9 791 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 MFSD6Q6ZSS7 791 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 STK11IPQ8N1F8 1099 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 MB21D1Q8N884 522 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 TTC14Q96N46 770 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 INCENPQ9NQS7 918 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 CLIP2Q9UDT6 1046 aa12.8□□□□□ -0.36
GPATCH4-206ENST00000474904 TSPY2A6NKD2 308 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 MAPK4P31152 587 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 IMMTQ16891 758 aaKnown RBP12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 TBC1D10CQ8IV04 446 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 PXYLP1Q8TE99 480 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 MAP4K1Q92918 833 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 PTCH2Q9Y6C5 1203 aa12.79□□□□□ -0.36
GPATCH4-206ENST00000474904 PLXNB2O15031 1838 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 RANBP6O60518 1105 aaKnown RBP12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 PLA2G6O60733 806 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 NDUFB10O96000 172 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 RGS19P49795 217 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 HAND2P61296 217 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 CCNA1P78396 465 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 ATP2B2Q01814 1243 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 SPICE1Q8N0Z3 855 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 ANKS1AQ92625 1134 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 COA7Q96BR5 231 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 GMCL1Q96IK5 515 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 BTBD7Q9P203 1132 aa12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
GPATCH4-206ENST00000474904 COL11A1P12107 1806 aaPredicted RBP12.77□□□□□ -0.37
GPATCH4-206ENST00000474904 FLOT1O75955 427 aa12.77□□□□□ -0.37
GPATCH4-206ENST00000474904 FLT3LGP49771 235 aa12.77□□□□□ -0.37
GPATCH4-206ENST00000474904 PTH1RQ03431 593 aa12.77□□□□□ -0.37
GPATCH4-206ENST00000474904 PRKCZQ05513 592 aa12.77□□□□□ -0.37
GPATCH4-206ENST00000474904 CCDC178Q5BJE1 867 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms