RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ICA1Q05084 483 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 APOBRQ0VD83 1088 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 WTAPQ15007 396 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
COL8A1-206ENST00000474648 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 BRF1Q92994 677 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 WDR18Q9BV38 432 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 STX8Q9UNK0 236 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 RBM19Q9Y4C8 960 aaKnown RBP11.75□□□□□ -0.53
COL8A1-206ENST00000474648 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
COL8A1-206ENST00000474648 ERICH2A1L162 156 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
COL8A1-206ENST00000474648 ECE1P42892 770 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 IFIT1BQ5T764 474 aaKnown RBP11.74□□□□□ -0.53
COL8A1-206ENST00000474648 SNX21Q969T3 373 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 ELP3Q9H9T3 547 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 AFG3L2Q9Y4W6 797 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 CSADQ9Y600 493 aa11.74□□□□□ -0.53
COL8A1-206ENST00000474648 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 ST18O60284 1047 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 PDIA3P30101 505 aaKnown RBP11.73□□□□□ -0.53
COL8A1-206ENST00000474648 GJA5P36382 358 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 FGD1P98174 961 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 ATP2B2Q01814 1243 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 PPATQ06203 517 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 TROAPQ12815 778 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 SPP2Q13103 211 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 KIAA1755Q5JYT7 1200 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 ERO1BQ86YB8 467 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 LRRC47Q8N1G4 583 aaKnown RBP11.73□□□□□ -0.53
COL8A1-206ENST00000474648 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 SLC10A4Q96EP9 437 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 ZNF274Q96GC6 653 aaPredicted RBP11.73□□□□□ -0.53
COL8A1-206ENST00000474648 LIMCH1Q9UPQ0 1083 aa11.73□□□□□ -0.53
COL8A1-206ENST00000474648 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 CCDC69A6NI79 296 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 F5H6K3 240 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 LARGE1O95461 756 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 HUNKP57058 714 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 KLRC3Q07444 240 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 ME3Q16798 604 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 NFXL1Q6ZNB6 911 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 NOL8Q76FK4 1167 aaKnown RBP11.72□□□□□ -0.53
COL8A1-206ENST00000474648 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 KIAA1683Q9H0B3 1180 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 KAT14Q9H8E8 782 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-206ENST00000474648 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-206ENST00000474648 SYNPO2Q9UMS6 1093 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
COL8A1-206ENST00000474648 GREB1LQ9C091 1923 aaPredicted RBP11.71□□□□□ -0.53
COL8A1-206ENST00000474648 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 CXCL11O14625 94 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 IRF6O14896 467 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 PFKFB2O60825 505 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 NDUFB10O96000 172 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 SNHG28P0DPA3 235 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 MCM2P49736 904 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 BACE1P56817 501 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 PPIL2Q13356 520 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 SLFN13Q68D06 897 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 CATIPQ7Z7H3 387 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 GMCL1P1Q8NEA9 526 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 AS3MTQ9HBK9 375 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 KCNH4Q9UQ05 1017 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.53
COL8A1-206ENST00000474648 PAPPA2Q9BXP8 1791 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 ZBTB43O43298 467 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 DDAH1O94760 285 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 RXRAP19793 462 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 RCAN1P53805 252 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 DGKZQ13574 1117 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 MTMR2Q13614 643 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 MOGSQ13724 837 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 GRM4Q14833 912 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 SH3D19Q5HYK7 790 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms