RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 SAGE1Q9NXZ1 904 aa18.57■□□□□ 0.56
COL1A1-204ENST00000474644 TRPA1O75762 1119 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 KIAA1755Q5JYT7 1200 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 CYB5R4Q7L1T6 521 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
COL1A1-204ENST00000474644 KCNB2Q92953 911 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 MKL1Q969V6 931 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 ZSWIM5Q9P217 1185 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 SYNPO2Q9UMS6 1093 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 SLC45A1Q9Y2W3 748 aa18.56■□□□□ 0.56
COL1A1-204ENST00000474644 CA12O43570 354 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 ZKSCAN1P17029 563 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-204ENST00000474644 TAF1CQ15572 869 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-204ENST00000474644 TSGA10IPQ3SY00 556 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 RCSD1Q6JBY9 416 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 IQCA1Q86XH1 822 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 SPICE1Q8N0Z3 855 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 LPAR1Q92633 364 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 ZSCAN10Q96SZ4 725 aaPredicted RBP18.55■□□□□ 0.56
COL1A1-204ENST00000474644 CFHR5Q9BXR6 569 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 GOPCQ9HD26 462 aa18.55■□□□□ 0.56
COL1A1-204ENST00000474644 TNKSO95271 1327 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 EIF5BO60841 1220 aaKnown RBP18.54■□□□□ 0.56
COL1A1-204ENST00000474644 SEC24BO95487 1268 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 ANTXR2P58335 489 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 PABPC4Q13310 644 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL1A1-204ENST00000474644 CRHR2Q13324 411 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 COL9A3Q14050 684 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-204ENST00000474644 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 SNX14Q9Y5W7 946 aa18.54■□□□□ 0.56
COL1A1-204ENST00000474644 F5H6K3 240 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 RAD21O60216 631 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 NDUFB10O96000 172 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 CYP2C8P10632 490 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 HOXA7P31268 230 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-204ENST00000474644 KLRC3Q07444 240 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 KRT32Q14532 448 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 CCDC178Q5BJE1 867 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 ENAHQ8N8S7 591 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-204ENST00000474644 GMCL1P1Q8NEA9 526 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 PARK7Q99497 189 aaKnown RBP18.53■□□□□ 0.56
COL1A1-204ENST00000474644 TMEM47Q9BQJ4 181 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 RPAP3Q9H6T3 665 aaPredicted RBP18.53■□□□□ 0.56
COL1A1-204ENST00000474644 TSKSQ9UJT2 592 aa18.53■□□□□ 0.56
COL1A1-204ENST00000474644 ADGRA2Q96PE1 1338 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 WDR46O15213 610 aaKnown RBP18.52■□□□□ 0.56
COL1A1-204ENST00000474644 TBC1D8O95759 1140 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 TOP1P11387 765 aaKnown RBP18.52■□□□□ 0.56
COL1A1-204ENST00000474644 MCCP23508 829 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 CHST3Q7LGC8 479 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 TTC14Q96N46 770 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 ASCC2Q9H1I8 757 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-204ENST00000474644 R3HDMLQ9H3Y0 253 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 ZFYVE28Q9HCC9 887 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 PNMA3Q9UL41 463 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 MYH4Q9Y623 1939 aa18.52■□□□□ 0.56
COL1A1-204ENST00000474644 USP17L15C9J2P7 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L13C9JLJ4 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L11C9JVI0 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L18D6R9N7 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L22D6RA61 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L17D6RBQ6 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L19D6RCP7 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L20D6RJB6 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 PRC1O43663 620 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 OSBPP22059 807 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 IRX3P78415 501 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-204ENST00000474644 USP17L24Q0WX57 530 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 SEC23AQ15436 765 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 ANKS1AQ92625 1134 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-204ENST00000474644 TANGO6Q9C0B7 1094 aa18.51■□□□□ 0.55
COL1A1-204ENST00000474644 IFIT3O14879 490 aaKnown RBP18.5■□□□□ 0.55
COL1A1-204ENST00000474644 MCM5P33992 734 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-204ENST00000474644 FAM83BQ5T0W9 1011 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 SLFN13Q68D06 897 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 CATSPERGQ6ZRH7 1159 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 RASGRP2Q7LDG7 609 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-204ENST00000474644 GMCL1Q96IK5 515 aa18.5■□□□□ 0.55
COL1A1-204ENST00000474644 TLR2O60603 784 aa18.49■□□□□ 0.55
COL1A1-204ENST00000474644 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
COL1A1-204ENST00000474644 SART3Q15020 963 aaKnown RBP18.49■□□□□ 0.55
COL1A1-204ENST00000474644 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
COL1A1-204ENST00000474644 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
COL1A1-204ENST00000474644 KAT14Q9H8E8 782 aa18.49■□□□□ 0.55
COL1A1-204ENST00000474644 PRDM10Q9NQV6 1147 aa18.49■□□□□ 0.55
COL1A1-204ENST00000474644 CASP8AP2Q9UKL3 1982 aa18.49■□□□□ 0.55
COL1A1-204ENST00000474644 ERICH2A1L162 156 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 HERVK_113P62684 666 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 TMEM67Q5HYA8 995 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 PNMA1Q8ND90 353 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
COL1A1-204ENST00000474644 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 SENP2Q9HC62 589 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 MTMR7Q9Y216 660 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms