RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-206ENST00000474564 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 DCAF4Q8WV16 495 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 GBA2Q9HCG7 927 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-206ENST00000474564 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
COL12A1-206ENST00000474564 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
COL12A1-206ENST00000474564 USP17L10C9JJH3 530 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 TOMM70O94826 608 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
COL12A1-206ENST00000474564 INPP5BP32019 993 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 NOVP48745 357 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 CUL4AQ13619 759 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 MAP3K11Q16584 847 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 SLFN13Q68D06 897 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 CDAN1Q8IWY9 1227 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 CCDC144CPQ8IYA2 1237 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 ZNF280CQ8ND82 737 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 GMCL1P1Q8NEA9 526 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.03□□□□□ -0.48
COL12A1-206ENST00000474564 LPAR1Q92633 364 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 WDR18Q9BV38 432 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-206ENST00000474564 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 CTDP1Q9Y5B0 961 aaPredicted RBP12.03□□□□□ -0.48
COL12A1-206ENST00000474564 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
COL12A1-206ENST00000474564 F5H6K3 240 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 CD2BP2O95400 341 aaKnown RBP12.02□□□□□ -0.49
COL12A1-206ENST00000474564 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 PTPRAP18433 802 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 SMARCA1P28370 1054 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 PPATQ06203 517 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 KLRC3Q07444 240 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 TROAPQ12815 778 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 TRIM29Q14134 588 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L2Q6R6M4 530 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 LRRC47Q8N1G4 583 aaKnown RBP12.02□□□□□ -0.49
COL12A1-206ENST00000474564 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
COL12A1-206ENST00000474564 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL12A1-206ENST00000474564 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
COL12A1-206ENST00000474564 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
COL12A1-206ENST00000474564 KLRF2D3W0D1 207 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 TRAF5O00463 557 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 BMP3P12645 472 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 SCRN1Q12765 414 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 FSTL1Q12841 308 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 SPP2Q13103 211 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 VGLL4Q14135 290 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 GRM4Q14833 912 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 MYL10Q9BUA6 226 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 VCPKMTQ9H867 229 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 MYH8P13535 1937 aa12.01□□□□□ -0.49
COL12A1-206ENST00000474564 UBE2Q2LH0YL09 131 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 SLURP2P0DP57 97 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 IFNAR1P17181 557 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 RXRAP19793 462 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 GUCY1A2P33402 732 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 BACE1P56817 501 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 PABPC4Q13310 644 aaKnown RBP eCLIP12□□□□□ -0.49
COL12A1-206ENST00000474564 FAM160B2Q86V87 743 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 RAB11FIP4Q86YS3 637 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
COL12A1-206ENST00000474564 RNF26Q9BY78 433 aaPredicted RBP12□□□□□ -0.49
COL12A1-206ENST00000474564 ELP3Q9H9T3 547 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 SENP2Q9HC62 589 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 NCOA5Q9HCD5 579 aaKnown RBP12□□□□□ -0.49
COL12A1-206ENST00000474564 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 PNMA2Q9UL42 364 aa12□□□□□ -0.49
COL12A1-206ENST00000474564 PALM3A6NDB9 673 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 TRIM75PA6NK02 468 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 H3BQV1 296 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 CXCL11O14625 94 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 WDR46O15213 610 aaKnown RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 DEXIO95424 95 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 ITGBL1O95965 494 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 PDHBP11177 359 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 NUCB2P80303 420 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 ZNF543Q08ER8 600 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 ZYXQ15942 572 aaKnown RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 LDLRAD1Q5T700 205 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 IFFO2Q5TF58 517 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 CLEC10AQ8IUN9 316 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 CCDC12Q8WUD4 166 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 SLC26A6Q9BXS9 759 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
COL12A1-206ENST00000474564 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
COL12A1-206ENST00000474564 NID2Q14112 1375 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms