RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RBM5P52756 815 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 BPIFB3P59826 476 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 SMC1AQ14683 1233 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 ARSHQ5FYA8 562 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 PPP2R2DQ66LE6 453 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 CYP4F22Q6NT55 531 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 SAMD7Q7Z3H4 446 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 SLC51AQ86UW1 340 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 UIMC1Q96RL1 719 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 FEZ1Q99689 392 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 PNNQ9H307 717 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 BRMS1Q9HCU9 246 aa7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 C9orf78Q9NZ63 289 aaPredicted RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 CDV3Q9UKY7 258 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-208ENST00000474246 FOXN3O00409 490 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC10A3P09131 477 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 HCLS1P14317 486 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 ADD2P35612 726 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 SARSP49591 514 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 COPAP53621 1224 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 TRDNQ13061 729 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 SERINC3Q13530 473 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 KIF22Q14807 665 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 TTF1Q15361 905 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 MUM1Q2TAK8 710 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC4A10Q6U841 1118 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 NUTM1Q86Y26 1132 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 NELL2Q99435 816 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 C2orf49Q9BVC5 232 aaPredicted RBP7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 FANCLQ9NW38 375 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 GTF3C4Q9UKN8 822 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 SNX5Q9Y5X3 404 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 EEA1Q15075 1411 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 KIAA0232Q92628 1395 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 KIF1AQ12756 1690 aa7.02□□□□□ -1.29
SMARCE1-208ENST00000474246 CCDC196A0A1B0GTZ2 297 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 ATF7P17544 494 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CAPN2P17655 700 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MECOMQ03112 1051 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 WTAPQ15007 396 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 ADGRD1Q6QNK2 874 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MMS22LQ6ZRQ5 1243 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 LRCH3Q96II8 777 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 VPS33BQ9H267 617 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 LIMD1Q9UGP4 676 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CEP131Q9UPN4 1083 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MBD5Q9P267 1494 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 A6NCN8 305 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 BHMG1C9JSJ3 638 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 FGRP09769 529 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MASP1P48740 699 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CDKN1CP49918 316 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 UBASH3AP57075 661 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CHAF1AQ13111 956 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 PODNQ7Z5L7 613 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 COL23A1Q86Y22 540 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CKAP2LQ8IYA6 745 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 GIMAP8Q8ND71 665 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MMTAG2Q9BU76 263 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 CSRNP2Q9H175 543 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 EPB41L4AQ9HCS5 686 aaPredicted RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 LRRC4BQ9NT99 713 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 NOVA2Q9UNW9 492 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 DAAM1Q9Y4D1 1078 aa7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 GOLGB1Q14789 3259 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-208ENST00000474246 MOXD2PA6NHM9 499 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 H0YHG0 523 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 IFIT2P09913 472 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 RAC2P15153 192 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 EPB42P16452 691 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 DDIT3P35638 169 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
SMARCE1-208ENST00000474246 ZC3H12BQ5HYM0 836 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 RASGRP2Q7LDG7 609 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 MRPL50Q8N5N7 158 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 GBP4Q96PP9 640 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 RBSNQ9H1K0 784 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 TRPV5Q9NQA5 729 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 EXOC1Q9NV70 894 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 N6AMT1Q9Y5N5 214 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 EIF2AK4Q9P2K8 1649 aaKnown RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 SOX1O00570 391 aaPredicted RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 SGTAO43765 313 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 SNX2O60749 519 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 ARIH2O95376 493 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 CAP2P40123 477 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 CHMP4BP1P59074 171 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 TTC31Q49AM3 519 aaPredicted RBP7□□□□□ -1.29
SMARCE1-208ENST00000474246 TJAP1Q5JTD0 557 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 SLC10A5Q5PT55 438 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 RIC3Q7Z5B4 369 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 NLRP13Q86W25 1043 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 VPS37DQ86XT2 251 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 ZNF354CQ86Y25 554 aa7□□□□□ -1.29
SMARCE1-208ENST00000474246 ERC1Q8IUD2 1116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms