RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GRK4P32298 578 aa4.48□□□□□ -1.69
CCDC39-203ENST00000473854 HHIPL2Q6UWX4 724 aa4.48□□□□□ -1.69
CCDC39-203ENST00000473854 Q96M66 194 aa4.48□□□□□ -1.69
CCDC39-203ENST00000473854 GIPC1O14908 333 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 AKAP8O43823 692 aaKnown RBP4.47□□□□□ -1.69
CCDC39-203ENST00000473854 CAP1Q01518 475 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 PDE4BQ07343 736 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.47□□□□□ -1.69
CCDC39-203ENST00000473854 ZFYVE27Q5T4F4 411 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 PI16Q6UXB8 463 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 NLRX1Q86UT6 975 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 SHISA4Q96DD7 197 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 ADAM7Q9H2U9 754 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 CEP131Q9UPN4 1083 aa4.47□□□□□ -1.69
CCDC39-203ENST00000473854 WASH4PA8MWX3 477 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 VIPR1P32241 457 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 EPHB3P54753 998 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 ZXDAP98168 799 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 FAM129CQ86XR2 697 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 NLGN1Q8N2Q7 840 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 DTWD2Q8NBA8 298 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 FBF1Q8TES7 1133 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 MZB1Q8WU39 189 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 LINC01599Q8WXQ3 324 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 TMEM87BQ96K49 555 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 CNTD2Q9H8S5 307 aa4.46□□□□□ -1.7
CCDC39-203ENST00000473854 LMNB1P20700 586 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 KIR2DL1P43626 348 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-203ENST00000473854 KIR2DL2P43627 348 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-203ENST00000473854 KCNC1P48547 511 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 YBX1P67809 324 aaKnown RBP4.45□□□□□ -1.7
CCDC39-203ENST00000473854 PLCB3Q01970 1234 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 RTP5Q14D33 572 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 SLC14A2Q15849 920 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 DIEXFQ68CQ4 756 aaKnown RBP4.45□□□□□ -1.7
CCDC39-203ENST00000473854 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 DNAJB8Q8NHS0 232 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 GAL3ST3Q96A11 431 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 EPB41L4AQ9HCS5 686 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-203ENST00000473854 ADAM30Q9UKF2 790 aa4.45□□□□□ -1.7
CCDC39-203ENST00000473854 NRDCO43847 1150 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 PGRP06401 933 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 PNLIPP16233 465 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 TNFRSF1AP19438 455 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 SERPINB4P48594 390 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 TEKQ02763 1124 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 VMACQ2NL98 169 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 UBXN11Q5T124 520 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 RASIP1Q5U651 963 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 LSRQ86X29 649 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-203ENST00000473854 RNF141Q8WVD5 230 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 PWWP2AQ96N64 755 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 TJP2Q9UDY2 1190 aa4.44□□□□□ -1.7
CCDC39-203ENST00000473854 PNMA6FA0A0J9YX94 578 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 RBM47A0AV96 593 aaKnown RBP4.43□□□□□ -1.7
CCDC39-203ENST00000473854 GRIN3BO60391 1043 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 FBXO24O75426 580 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 MPOP05164 745 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 ARL4AP40617 200 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 MAGEA10P43363 369 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-203ENST00000473854 CDR1P51861 262 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 CLEC16AQ2KHT3 1053 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 RNF111Q6ZNA4 994 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 SV2BQ7L1I2 683 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 MCATQ8IVS2 390 aaKnown RBP4.43□□□□□ -1.7
CCDC39-203ENST00000473854 TMEFF1Q8IYR6 380 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 CYB5D2Q8WUJ1 264 aa4.43□□□□□ -1.7
CCDC39-203ENST00000473854 DPH2Q9BQC3 489 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-203ENST00000473854 OVOL3O00110 214 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 CELA3AP09093 270 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 ERVFRD-1P60508 538 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 RPS26P62854 115 aaKnown RBP4.42□□□□□ -1.7
CCDC39-203ENST00000473854 PTPN11Q06124 597 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-203ENST00000473854 ENOX2Q16206 610 aaKnown RBP4.42□□□□□ -1.7
CCDC39-203ENST00000473854 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-203ENST00000473854 SIRT2Q8IXJ6 389 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 ASPNQ9BXN1 380 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 ASCC2Q9H1I8 757 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-203ENST00000473854 USP40Q9NVE5 1235 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 USTQ9Y2C2 406 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 ZNF281Q9Y2X9 895 aa4.42□□□□□ -1.7
CCDC39-203ENST00000473854 GFRA2O00451 464 aa4.41□□□□□ -1.7
CCDC39-203ENST00000473854 YARSP54577 528 aaKnown RBP4.41□□□□□ -1.7
CCDC39-203ENST00000473854 ENOX1Q8TC92 643 aaKnown RBP4.41□□□□□ -1.7
CCDC39-203ENST00000473854 MAP6Q96JE9 813 aa4.41□□□□□ -1.7
CCDC39-203ENST00000473854 SORCS2Q96PQ0 1159 aa4.41□□□□□ -1.7
CCDC39-203ENST00000473854 G6PC3Q9BUM1 346 aa4.41□□□□□ -1.7
CCDC39-203ENST00000473854 ZMYM5Q9UJ78 669 aa4.41□□□□□ -1.7
CCDC39-203ENST00000473854 C1QTNF3-AMACRE9PGA6 284 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 USP2O75604 605 aaPredicted RBP4.4□□□□□ -1.71
CCDC39-203ENST00000473854 GALK1P51570 392 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 SLURP1P55000 103 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 LAPTM5Q13571 262 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 TTBK2Q6IQ55 1244 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 CEP128Q6ZU80 1094 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 LDHDQ86WU2 507 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 IGDCC3Q8IVU1 814 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 SLC16A11Q8NCK7 471 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 FAM8A1Q9UBU6 413 aa4.4□□□□□ -1.71
CCDC39-203ENST00000473854 EBF1Q9UH73 591 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms