RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PUF60Q9UHX1 559 aaKnown RBP6.9□□□□□ -1.31
HERC4-209ENST00000473533 TCRBV5S4A2TA0A5A2 114 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 MBD4O95243 580 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 PRR29P0C7W0 189 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 IL2RBP14784 551 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CASP14P31944 242 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 LONP1P36776 959 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 EIF5P55010 431 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 ST5P78524 1137 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 SCARF1Q14162 830 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 RRAGBQ5VZM2 374 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 RAD9BQ6WBX8 426 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CUEDC2Q9H467 287 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 THAP9Q9H5L6 903 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CABP5Q9NP86 173 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 PIH1D3Q9NQM4 214 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 ANAPC4Q9UJX5 808 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 LUC7L2Q9Y383 392 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 DISP2A7MBM2 1401 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 BICDL2A1A5D9 508 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 OPA1O60313 960 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 USO1O60763 962 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CCDC178Q5BJE1 867 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 TTC38Q5R3I4 469 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 KLHL10Q6JEL2 608 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 SPATS2Q86XZ4 545 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 EFCAB13Q8IY85 973 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 SMARCC1Q92922 1105 aaPredicted RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 ABCB6Q9NP58 842 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 PCDHB6Q9Y5E3 794 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 SAR1BQ9Y6B6 198 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 EPN1Q9Y6I3 576 aaPredicted RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 SLC4A4Q9Y6R1 1079 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 MYH3P11055 1940 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 AKAP11Q9UKA4 1901 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 ERVV-1B6SEH8 477 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 PSMA7O14818 248 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 RXRAP19793 462 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 KRT9P35527 623 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 DNM2P50570 870 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 USP14P54578 494 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 ITIH3Q06033 890 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 GOLGA8FQ08AF8 430 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 GOLGA8DPQ0D2H9 430 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 TTC31Q49AM3 519 aaPredicted RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 DNAJC21Q5F1R6 531 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 TOM1L2Q6ZVM7 507 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 KIAA1328Q86T90 577 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 IPO4Q8TEX9 1081 aaKnown RBP6.89□□□□□ -1.31
HERC4-209ENST00000473533 NUP133Q8WUM0 1156 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CPLX3Q8WVH0 158 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 PHF20Q9BVI0 1012 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 CTNND2Q9UQB3 1225 aa6.89□□□□□ -1.31
HERC4-209ENST00000473533 KCNJ18B7U540 433 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 IRS4O14654 1257 aaPredicted RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 FGFR1OPO95684 399 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 GYPCP04921 128 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 ATP2C1P98194 919 aaPredicted RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 KCNJ12Q14500 433 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 KRT31Q15323 416 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 TCP11X2Q5H9J9 407 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 MAGEB6Q8N7X4 407 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 CAGE1Q8TC20 777 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 SYMPKQ92797 1274 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 CDC5LQ99459 802 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 TRIM34Q9BYJ4 488 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 LUC7LQ9NQ29 371 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 KCNJ14Q9UNX9 436 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 DOCK2Q92608 1830 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 LAD1O00515 517 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 FANCGO15287 622 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 FOXN1O15353 648 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 NDUFA10O95299 355 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 KIF5BP33176 963 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 AFMP43652 599 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 APBA1Q02410 837 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 KCNB1Q14721 858 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 GALNT17Q6IS24 598 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 APTXQ7Z2E3 356 aaKnown RBP6.88□□□□□ -1.31
HERC4-209ENST00000473533 VGLL2Q8N8G2 317 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 TAOK2Q9UL54 1235 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 ANKRD36CQ5JPF3 1778 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 LRP5O75197 1615 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 BCL9LQ86UU0 1499 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 GOLGA8KD6RF30 607 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 H3BQF6 201 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 TEX33O43247 280 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 RHOXF2BP0C7M4 288 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 CDK17Q00537 523 aa6.88□□□□□ -1.31
HERC4-209ENST00000473533 UBXN1Q04323 297 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms