RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 TMEM179Q6ZVK1 233 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 SOCS4Q8WXH5 440 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 PORCNQ9H237 461 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 RABGAP1Q9Y3P9 1069 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 MYH4Q9Y623 1939 aa21.59■■□□□ 1.05
SNX4-204ENST00000473417 CYP2D7A0A087X1C5 515 aa21.58■■□□□ 1.05
SNX4-204ENST00000473417 CNMDO75829 334 aa21.58■■□□□ 1.05
SNX4-204ENST00000473417 HABP4Q5JVS0 413 aaKnown RBP21.58■■□□□ 1.05
SNX4-204ENST00000473417 TTC22Q5TAA0 569 aa21.58■■□□□ 1.05
SNX4-204ENST00000473417 AMOTL1Q8IY63 956 aa21.58■■□□□ 1.05
SNX4-204ENST00000473417 DDRGK1Q96HY6 314 aa21.58■■□□□ 1.05
SNX4-204ENST00000473417 USP17L12C9JPN9 530 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 USP17L21D6R901 530 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 SMIM22K7EJ46 135 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 GSPT1P15170 499 aaKnown RBP21.57■■□□□ 1.04
SNX4-204ENST00000473417 CAPN2P17655 700 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 C16orf86Q6ZW13 317 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 TRIB2Q92519 343 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 DEFB118Q96PH6 123 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 NUDT12Q9BQG2 462 aa21.57■■□□□ 1.04
SNX4-204ENST00000473417 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.57■■□□□ 1.04
SNX4-204ENST00000473417 RPAP3Q9H6T3 665 aaPredicted RBP21.57■■□□□ 1.04
SNX4-204ENST00000473417 SPDYE16A6NNV3 312 aaPredicted RBP21.56■■□□□ 1.04
SNX4-204ENST00000473417 XRCC5P13010 732 aaKnown RBP21.56■■□□□ 1.04
SNX4-204ENST00000473417 AKR1B1P15121 316 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 CCDC129Q6ZRS4 1044 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 GPR142Q7Z601 462 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 USP6NLQ92738 828 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 CCDC17Q96LX7 622 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 CRISPLD2Q9H0B8 497 aa21.56■■□□□ 1.04
SNX4-204ENST00000473417 GSG1L2A8MUP6 293 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 FARP2O94887 1054 aaPredicted RBP21.55■■□□□ 1.04
SNX4-204ENST00000473417 APPP05067 770 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 GNAT2P19087 354 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 SDSP20132 328 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 CYP2B6P20813 491 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 CDK8P49336 464 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 TRIM32Q13049 653 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 NMIQ13287 307 aaPredicted RBP21.55■■□□□ 1.04
SNX4-204ENST00000473417 CTR9Q6PD62 1173 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 PLEKHH3Q7Z736 793 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 CLEC10AQ8IUN9 316 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 HELLSQ9NRZ9 838 aa21.55■■□□□ 1.04
SNX4-204ENST00000473417 ARPP21Q9UBL0 812 aaPredicted RBP21.55■■□□□ 1.04
SNX4-204ENST00000473417 ZNFX1Q9P2E3 1918 aaKnown RBP21.55■■□□□ 1.04
SNX4-204ENST00000473417 ROBO3Q96MS0 1386 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 A0A0D9SFI3 127 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 CCNA1P78396 465 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 ICA1Q05084 483 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 MORN1Q5T089 497 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 SIAH1Q8IUQ4 282 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 CCAR1Q8IX12 1150 aaKnown RBP21.54■■□□□ 1.04
SNX4-204ENST00000473417 ARHGEF10LQ9HCE6 1279 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 BTBD7Q9P203 1132 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 TMX2Q9Y320 296 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 RPTORQ8N122 1335 aa21.54■■□□□ 1.04
SNX4-204ENST00000473417 PATL2C9JE40 543 aaKnown RBP21.53■■□□□ 1.04
SNX4-204ENST00000473417 MCMDC2Q4G0Z9 681 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 KIAA1755Q5JYT7 1200 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 MAP3K21Q5TCX8 1036 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 TICAM2Q86XR7 235 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 SH2D4AQ9H788 454 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 PPP4R2Q9NY27 417 aa21.53■■□□□ 1.04
SNX4-204ENST00000473417 TFRCP02786 760 aaKnown RBP21.52■■□□□ 1.04
SNX4-204ENST00000473417 RGS2P41220 211 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 SBK1Q52WX2 424 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 GIMAP6Q6P9H5 292 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 TRMT44Q8IYL2 757 aaKnown RBP21.52■■□□□ 1.04
SNX4-204ENST00000473417 LPAR1Q92633 364 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 DPF3Q92784 378 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 APBA2Q99767 749 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 HTATIP2Q9BUP3 242 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 TANGO6Q9C0B7 1094 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 EPB41L4AQ9HCS5 686 aaPredicted RBP21.52■■□□□ 1.04
SNX4-204ENST00000473417 HMX1Q9NP08 348 aaPredicted RBP21.52■■□□□ 1.04
SNX4-204ENST00000473417 DIAPH3Q9NSV4 1193 aa21.52■■□□□ 1.04
SNX4-204ENST00000473417 PLXNA1Q9UIW2 1896 aa21.52■■□□□ 1.03
SNX4-204ENST00000473417 H0YGN5 161 aa21.51■■□□□ 1.03
SNX4-204ENST00000473417 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
SNX4-204ENST00000473417 TDO2P48775 406 aa21.51■■□□□ 1.03
SNX4-204ENST00000473417 COG2Q14746 738 aa21.51■■□□□ 1.03
SNX4-204ENST00000473417 CWC27Q6UX04 472 aaKnown RBP21.51■■□□□ 1.03
SNX4-204ENST00000473417 IFNL3Q8IZI9 196 aa21.51■■□□□ 1.03
SNX4-204ENST00000473417 VCPKMTQ9H867 229 aa21.51■■□□□ 1.03
SNX4-204ENST00000473417 MINDY4BA8MYZ0 360 aa21.5■■□□□ 1.03
SNX4-204ENST00000473417 PRKAR2AP13861 404 aaKnown RBP21.5■■□□□ 1.03
SNX4-204ENST00000473417 MAP2K5Q13163 448 aa21.5■■□□□ 1.03
SNX4-204ENST00000473417 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
SNX4-204ENST00000473417 CWC22Q9HCG8 908 aaKnown RBP21.5■■□□□ 1.03
SNX4-204ENST00000473417 COLQQ9Y215 455 aaPredicted RBP21.5■■□□□ 1.03
SNX4-204ENST00000473417 HIP1O00291 1037 aa21.49■■□□□ 1.03
SNX4-204ENST00000473417 PTPREP23469 700 aa21.49■■□□□ 1.03
SNX4-204ENST00000473417 CCL14Q16627 93 aa21.49■■□□□ 1.03
SNX4-204ENST00000473417 VPS53Q5VIR6 699 aa21.49■■□□□ 1.03
SNX4-204ENST00000473417 ZNF589Q86UQ0 364 aaPredicted RBP21.49■■□□□ 1.03
SNX4-204ENST00000473417 ANKLE1Q8NAG6 615 aa21.49■■□□□ 1.03
SNX4-204ENST00000473417 HOXC10Q9NYD6 342 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms