RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 VCAM1P19320 739 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 NOVP48745 357 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 CREB3L3Q68CJ9 461 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 R3HDMLQ9H3Y0 253 aa24.52■■□□□ 1.52
TOP3A-204ENST00000472959 GREB1LQ9C091 1923 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L15C9J2P7 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L13C9JLJ4 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L11C9JVI0 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L18D6R9N7 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L22D6RA61 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L17D6RBQ6 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L19D6RCP7 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L20D6RJB6 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 E7EWF7 191 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 NMT2O60551 498 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 LBX1P52954 281 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 USP17L24Q0WX57 530 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 IQCA1Q86XH1 822 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 TTC14Q96N46 770 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 ASCC2Q9H1I8 757 aaPredicted RBP24.51■■□□□ 1.51
TOP3A-204ENST00000472959 STX8Q9UNK0 236 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 LAMA4Q16363 1823 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 PTPRFP10586 1907 aa24.51■■□□□ 1.51
TOP3A-204ENST00000472959 GPR25O00155 361 aa24.5■■□□□ 1.51
TOP3A-204ENST00000472959 EIF5BO60841 1220 aaKnown RBP24.5■■□□□ 1.51
TOP3A-204ENST00000472959 CYP2C8P10632 490 aa24.5■■□□□ 1.51
TOP3A-204ENST00000472959 IRX3P78415 501 aaPredicted RBP24.5■■□□□ 1.51
TOP3A-204ENST00000472959 RALYLQ86SE5 291 aaKnown RBP24.5■■□□□ 1.51
TOP3A-204ENST00000472959 NCOA7Q8NI08 942 aa24.5■■□□□ 1.51
TOP3A-204ENST00000472959 SMCR8Q8TEV9 937 aaPredicted RBP24.5■■□□□ 1.51
TOP3A-204ENST00000472959 PRDM10Q9NQV6 1147 aa24.5■■□□□ 1.51
TOP3A-204ENST00000472959 ZSWIM5Q9P217 1185 aa24.5■■□□□ 1.51
TOP3A-204ENST00000472959 F5H6K3 240 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 WDR46O15213 610 aaKnown RBP24.49■■□□□ 1.51
TOP3A-204ENST00000472959 KLRC3Q07444 240 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 KIAA1755Q5JYT7 1200 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 CATSPERGQ6ZRH7 1159 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 GMCL1P1Q8NEA9 526 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 RPAP3Q9H6T3 665 aaPredicted RBP24.49■■□□□ 1.51
TOP3A-204ENST00000472959 TAF6LQ9Y6J9 622 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 LOC285556D6RIA3 1793 aa24.49■■□□□ 1.51
TOP3A-204ENST00000472959 GCLCP48506 637 aaPredicted RBP24.48■■□□□ 1.51
TOP3A-204ENST00000472959 DGKHQ86XP1 1220 aa24.48■■□□□ 1.51
TOP3A-204ENST00000472959 SPICE1Q8N0Z3 855 aa24.48■■□□□ 1.51
TOP3A-204ENST00000472959 NKX2-3Q8TAU0 364 aa24.48■■□□□ 1.51
TOP3A-204ENST00000472959 ADGRA2Q96PE1 1338 aa24.48■■□□□ 1.51
TOP3A-204ENST00000472959 TOP1P11387 765 aaKnown RBP24.47■■□□□ 1.51
TOP3A-204ENST00000472959 ZKSCAN1P17029 563 aaPredicted RBP24.47■■□□□ 1.51
TOP3A-204ENST00000472959 C17orf99Q6UX52 265 aa24.47■■□□□ 1.51
TOP3A-204ENST00000472959 STOX1Q6ZVD7 989 aa24.47■■□□□ 1.51
TOP3A-204ENST00000472959 LRRC47Q8N1G4 583 aaKnown RBP24.47■■□□□ 1.51
TOP3A-204ENST00000472959 GTF3C2Q8WUA4 911 aaPredicted RBP24.47■■□□□ 1.51
TOP3A-204ENST00000472959 ZSCAN10Q96SZ4 725 aaPredicted RBP24.47■■□□□ 1.51
TOP3A-204ENST00000472959 UBAC1Q9BSL1 405 aa24.47■■□□□ 1.51
TOP3A-204ENST00000472959 RAD21O60216 631 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 FKTNO75072 461 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 NDUFB10O96000 172 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 TSGA10IPQ3SY00 556 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 ZNF296Q8WUU4 475 aaPredicted RBP24.46■■□□□ 1.51
TOP3A-204ENST00000472959 ANKS1AQ92625 1134 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 P2RX7Q99572 595 aaKnown RBP24.46■■□□□ 1.51
TOP3A-204ENST00000472959 TANGO6Q9C0B7 1094 aa24.46■■□□□ 1.51
TOP3A-204ENST00000472959 SP3Q02447 781 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 COG2Q14746 738 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 RCSD1Q6JBY9 416 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 TMEM47Q9BQJ4 181 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 ZKSCAN3Q9BRR0 538 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 HOXC10Q9NYD6 342 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 CPA4Q9UI42 421 aa24.45■■□□□ 1.5
TOP3A-204ENST00000472959 BCRP11274 1271 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 HSPA4P34932 840 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 HERVK_113P62684 666 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 KRT32Q14532 448 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 SLFN13Q68D06 897 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 CYB5R4Q7L1T6 521 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 KCNB2Q92953 911 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 GMCL1Q96IK5 515 aa24.44■■□□□ 1.5
TOP3A-204ENST00000472959 SART3Q15020 963 aaKnown RBP24.43■■□□□ 1.5
TOP3A-204ENST00000472959 LBX2Q6XYB7 198 aa24.43■■□□□ 1.5
TOP3A-204ENST00000472959 MB21D2Q8IYB1 491 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-204ENST00000472959 ENAHQ8N8S7 591 aaPredicted RBP24.43■■□□□ 1.5
TOP3A-204ENST00000472959 USP26Q9BXU7 913 aa24.43■■□□□ 1.5
TOP3A-204ENST00000472959 TNKSO95271 1327 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 MYPNQ86TC9 1320 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 FLOT1O75955 427 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 FAM83BQ5T0W9 1011 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 RASEFQ8IZ41 740 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 MTA3Q9BTC8 594 aa24.42■■□□□ 1.5
TOP3A-204ENST00000472959 ERICH2A1L162 156 aa24.41■■□□□ 1.5
TOP3A-204ENST00000472959 MCM5P33992 734 aa24.41■■□□□ 1.5
TOP3A-204ENST00000472959 FAM110CQ1W6H9 321 aa24.41■■□□□ 1.5
TOP3A-204ENST00000472959 ERO1AQ96HE7 468 aa24.41■■□□□ 1.5
TOP3A-204ENST00000472959 IFIT3O14879 490 aaKnown RBP24.4■■□□□ 1.5
TOP3A-204ENST00000472959 BMP3P12645 472 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 MCCP23508 829 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 SLC1A4P43007 532 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 ARHGEF6Q15052 776 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 SEC23AQ15436 765 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 ANKRD13CQ8N6S4 541 aa24.4■■□□□ 1.5
TOP3A-204ENST00000472959 DCAF4Q8WV16 495 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms