RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 RFX5P48382 616 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-205ENST00000472928 FUT2Q10981 343 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 NFIAQ12857 509 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 G3BP1Q13283 466 aaKnown RBP eCLIP7.74□□□□□ -1.17
HDAC1-205ENST00000472928 TAF7LQ5H9L4 462 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 PRRT2Q7Z6L0 340 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-205ENST00000472928 ANKLE1Q8NAG6 615 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 TBC1D22AQ8WUA7 517 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 GDPD2Q9HCC8 539 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 CNNM1Q9NRU3 951 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 TMOD2Q9NZR1 351 aa7.74□□□□□ -1.17
HDAC1-205ENST00000472928 COL2A1P02458 1487 aaPredicted RBP7.74□□□□□ -1.17
HDAC1-205ENST00000472928 POTEB3A0JP26 581 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 PHF20L1A8MW92 1017 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 TNPO2O14787 897 aaKnown RBP7.73□□□□□ -1.17
HDAC1-205ENST00000472928 MX1P20591 662 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 CCDC57Q2TAC2 916 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 POTEBQ6S5H4 581 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 HHIPL2Q6UWX4 724 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 FAM151AQ8WW52 585 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 ZFRQ96KR1 1074 aaKnown RBP7.73□□□□□ -1.17
HDAC1-205ENST00000472928 UBE2OQ9C0C9 1292 aaKnown RBP7.73□□□□□ -1.17
HDAC1-205ENST00000472928 COPRSQ9NQ92 184 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 SLC45A1Q9Y2W3 748 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 PFASO15067 1338 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 SALL3Q9BXA9 1300 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 DOCK2Q92608 1830 aa7.73□□□□□ -1.17
HDAC1-205ENST00000472928 PTPRFP10586 1907 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 TRIM32Q13049 653 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 MTMR2Q13614 643 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 C8orf34Q49A92 452 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 TTC22Q5TAA0 569 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 TSHZ3Q63HK5 1081 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 FAM109BQ6ICB4 259 aaPredicted RBP7.72□□□□□ -1.17
HDAC1-205ENST00000472928 CDC42EP5Q6NZY7 148 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 FASTKD5Q7L8L6 764 aaKnown RBP7.72□□□□□ -1.17
HDAC1-205ENST00000472928 AACSQ86V21 672 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 ZFPM1Q8IX07 1006 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 CLASRPQ8N2M8 674 aaKnown RBP7.72□□□□□ -1.17
HDAC1-205ENST00000472928 VGLL2Q8N8G2 317 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 HS3ST6Q96QI5 342 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 C11orf49Q9H6J7 331 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 PRDM6Q9NQX0 595 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 OGDHLQ9ULD0 1010 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 SUGT1Q9Y2Z0 365 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 DAGLAQ9Y4D2 1042 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
HDAC1-205ENST00000472928 DDX60LQ5H9U9 1706 aaKnown RBP7.72□□□□□ -1.17
HDAC1-205ENST00000472928 EYA2O00167 538 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 CIAO1O76071 339 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 HMGCRP04035 888 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 IFIT2P09913 472 aaKnown RBP7.71□□□□□ -1.18
HDAC1-205ENST00000472928 SLURP2P0DP57 97 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 GSPT1P15170 499 aaKnown RBP7.71□□□□□ -1.18
HDAC1-205ENST00000472928 PTPRAP18433 802 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 PDE1AP54750 535 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 TCP10Q12799 353 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 TFCP2Q12800 502 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 FAM110CQ1W6H9 321 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 BMP2KLQ5H9B9 411 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 GADL1Q6ZQY3 521 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 VPS37DQ86XT2 251 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 SCYL3Q8IZE3 742 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 ANKRD13CQ8N6S4 541 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 COA7Q96BR5 231 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 GPATCH3Q96I76 525 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 GJD2Q9UKL4 321 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
HDAC1-205ENST00000472928 ZHX2Q9Y6X8 837 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 MAST3O60307 1309 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 MROH5Q6ZUA9 1318 aa7.71□□□□□ -1.18
HDAC1-205ENST00000472928 MAST2Q6P0Q8 1798 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 RNF40O75150 1001 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 COL6A1P12109 1028 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 IL15P40933 162 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 LRRC24Q50LG9 513 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 TREML2Q5T2D2 321 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 MAP3K21Q5TCX8 1036 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 SH3BP5LQ7L8J4 393 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 ATG9AQ7Z3C6 839 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 CCDC84Q86UT8 332 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 SMCR8Q8TEV9 937 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 BACH2Q9BYV9 841 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 PLSCR2Q9NRY7 297 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 TLR7Q9NYK1 1049 aaKnown RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 AGTPBP1Q9UPW5 1226 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.7□□□□□ -1.18
HDAC1-205ENST00000472928 RFX7Q2KHR2 1363 aa7.7□□□□□ -1.18
HDAC1-205ENST00000472928 PHIPQ8WWQ0 1821 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 MYO9BQ13459 2157 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 CFAP99D6REC4 459 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 FRAT2O75474 233 aaPredicted RBP7.69□□□□□ -1.18
HDAC1-205ENST00000472928 FGFR2P21802 821 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 ABL2P42684 1182 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 LSM11P83369 360 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC1-205ENST00000472928 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 CTDSPL2Q05D32 466 aa7.69□□□□□ -1.18
HDAC1-205ENST00000472928 LRRC26Q2I0M4 334 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms