RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 COMMD10Q9Y6G5 202 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 FZD9O00144 591 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PRODHO43272 600 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA12O60330 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 UBOX5O94941 541 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ATE1O95260 518 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 MYL1P05976 194 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 MYBL2P10244 700 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PF4V1P10720 104 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ESRRAP11474 423 aaPredicted RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 PLCG1P19174 1290 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 EIF2AK2P19525 551 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 RPS26P62854 115 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 FSTL4Q6MZW2 842 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 CATIPQ7Z7H3 387 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 ZNF227Q86WZ6 799 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 SPICE1Q8N0Z3 855 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 RIN3Q8TB24 985 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 BTN2A2Q8WVV5 523 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 HAUS7Q99871 368 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 CARD10Q9BWT7 1032 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 CEP44Q9C0F1 390 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 CCDC86Q9H6F5 360 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 PPP4R2Q9NY27 417 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 KCNH4Q9UQ05 1017 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA9Q9Y5G4 932 aaKnown RBP3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA8Q9Y5G5 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA7Q9Y5G6 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA6Q9Y5G7 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA3Q9Y5H0 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGA2Q9Y5H1 932 aa3.45□□□□□ -1.86
XRN1-210ENST00000472697 BAZ1BQ9UIG0 1483 aaKnown RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 CEP164Q9UPV0 1460 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 CHD1O14646 1710 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 TRBV23-1A0A0A0MS06 115 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 TTC24A2A3L6 582 aaPredicted RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 TTLL8A6PVC2 850 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 DDX3YO15523 660 aaKnown RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 GDF9O60383 454 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 CRTAMO95727 393 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 LIG1P18858 919 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 NTF4P34130 210 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 CTBSQ01459 385 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 TNP2Q05952 138 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 SAFB2Q14151 953 aaKnown RBP eCLIP3.44□□□□□ -1.86
XRN1-210ENST00000472697 SIM2Q14190 667 aaPredicted RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 LLGL1Q15334 1064 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 DBN1Q16643 649 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 PPM1JQ5JR12 505 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 KCNT2Q6UVM3 1135 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 NRSN2Q9GZP1 204 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 BCCIPQ9P287 314 aaKnown RBP eCLIP3.44□□□□□ -1.86
XRN1-210ENST00000472697 EDARQ9UNE0 448 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 LOC102724428A0A0B4J2F2 783 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 PRSS47A8MTI9 375 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 NRDCO43847 1150 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 ZNF862O60290 1169 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 ASGR2P07307 311 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 FAM163BP0C2L3 166 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 NME2P22392 152 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 SIK1P57059 783 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 INO80DQ53TQ3 878 aaPredicted RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 DDX46Q7L014 1031 aaKnown RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 ZBTB46Q86UZ6 589 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 TMEM102Q8N9M5 508 aaPredicted RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 DDX1Q92499 740 aaKnown RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 ACSBG1Q96GR2 724 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 KIF2CQ99661 725 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 EIF2AK1Q9BQI3 630 aaKnown RBP3.44□□□□□ -1.86
XRN1-210ENST00000472697 CRISPLD1Q9H336 500 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 SPTLC3Q9NUV7 552 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 TOR4AQ9NXH8 423 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 SAGE1Q9NXZ1 904 aa3.44□□□□□ -1.86
XRN1-210ENST00000472697 MEIS3P2A8K0S8 358 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ALG1L2C9J202 215 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 C2CD2LO14523 706 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 KIF3BO15066 747 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 CAPN5O15484 640 aaPredicted RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 OPA1O60313 960 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 EIF3JO75822 258 aaKnown RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 CAPNS1P04632 268 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ARAFP10398 606 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PABPC1P11940 636 aaKnown RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 RLBP1P12271 317 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GTF2E1P29083 439 aaPredicted RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 SOX5P35711 763 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 COBLL1Q53SF7 1204 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 HSP90AB4PQ58FF6 505 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PIK3R6Q5UE93 754 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 MORC1Q86VD1 984 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 TGFBRAP1Q8WUH2 860 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ZFP42Q96MM3 310 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GPR101Q96P66 508 aaPredicted RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 TM9SF2Q99805 663 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 TSEN34Q9BSV6 310 aaKnown RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 RUSC1Q9BVN2 902 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 AS3MTQ9HBK9 375 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ZNF214Q9UL59 606 aaPredicted RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 SOX13Q9UN79 622 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 DNAJC25-GNG10A0A024R161 153 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms