RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 USHBP1Q8N6Y0 703 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 FOXD4L4Q8WXT5 416 aaPredicted RBP4.76□□□□□ -1.65
XRN1-209ENST00000472625 SPACA7Q96KW9 195 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 BRPF3Q9ULD4 1205 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 ANKRD26Q9UPS8 1709 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 PPME1Q9Y570 386 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 CNTNAP4Q9C0A0 1308 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 C10orf71Q711Q0 1435 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 PDE2AO00408 941 aaPredicted RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 PPM1GO15355 546 aaPredicted RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 TREHO43280 583 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 SMNDC1O75940 238 aaKnown RBP eCLIP4.75□□□□□ -1.65
XRN1-209ENST00000472625 TOMM70O94826 608 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 PHKG2P15735 406 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 CDC27P30260 824 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 RFC4P35249 363 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 GRIA4P48058 902 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 PLEKHO1Q53GL0 409 aaPredicted RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 CCNJLQ8IV13 435 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 C16orf71Q8IYS4 520 aaPredicted RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 UBASH3BQ8TF42 649 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 PIGBQ92521 554 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 CITED4Q96RK1 184 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 UBL7Q96S82 380 aaPredicted RBP4.75□□□□□ -1.65
XRN1-209ENST00000472625 NIF3L1Q9GZT8 377 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 MUC3BQ9H195 1237 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 KDRP35968 1356 aa4.75□□□□□ -1.65
XRN1-209ENST00000472625 KDM2BQ8NHM5 1336 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 TUBGCP6Q96RT7 1819 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 ZNF831Q5JPB2 1677 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 SOX1O00570 391 aaPredicted RBP4.74□□□□□ -1.65
XRN1-209ENST00000472625 EIF1AYO14602 144 aaKnown RBP4.74□□□□□ -1.65
XRN1-209ENST00000472625 FSCN2O14926 492 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 NDUFB5O43674 189 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 HYAL3O43820 417 aaPredicted RBP4.74□□□□□ -1.65
XRN1-209ENST00000472625 MMP10P09238 476 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 PCSK2P16519 638 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 AAMPQ13685 434 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 LRP8Q14114 963 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 KIAA0319Q5VV43 1072 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 PI16Q6UXB8 463 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 DZIP1LQ8IYY4 767 aaKnown RBP4.74□□□□□ -1.65
XRN1-209ENST00000472625 PMEPA1Q969W9 287 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 SETDB2Q96T68 719 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 NPHS2Q9NP85 383 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 DCTN4Q9UJW0 460 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 PXDNLA1KZ92 1463 aa4.74□□□□□ -1.65
XRN1-209ENST00000472625 KAT6BQ8WYB5 2073 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 TOGARAM1Q9Y4F4 1720 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 DLGAP3O95886 979 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 FSTP19883 344 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 CD68P34810 354 aaPredicted RBP4.73□□□□□ -1.65
XRN1-209ENST00000472625 CABP4P57796 275 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 FMR1Q06787 632 aaKnown RBP eCLIP4.73□□□□□ -1.65
XRN1-209ENST00000472625 FSTL1Q12841 308 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 TRIM26Q12899 539 aaPredicted RBP4.73□□□□□ -1.65
XRN1-209ENST00000472625 SPRED3Q2MJR0 410 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 KIAA1211Q6ZU35 1233 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 NBPF11Q86T75 865 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 CACTIN-AS1Q8N1I8 211 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 TMEM130Q8N3G9 435 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 LINC00116Q8NCU8 138 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 ZNF526Q8TF50 670 aaPredicted RBP4.73□□□□□ -1.65
XRN1-209ENST00000472625 SLC7A3Q8WY07 619 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 CCDC74AQ96AQ1 378 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 KLHDC7BQ96G42 594 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 CSRNP1Q96S65 589 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 ABCB6Q9NP58 842 aa4.73□□□□□ -1.65
XRN1-209ENST00000472625 H3BRJ5 948 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 CPNE3O75131 537 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 RPS6KA4O75676 772 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 CTSBP07858 339 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 ESRRAP11474 423 aaPredicted RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 EDN3P14138 238 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 PTPRAP18433 802 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 SSTR4P31391 388 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 MTHFSP49914 203 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 NLRP12P59046 1061 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 EIF4A2Q14240 407 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 ENOX2Q16206 610 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 ZNF423Q2M1K9 1284 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 DALRD3Q5D0E6 543 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 ZNF530Q6P9A1 599 aaPredicted RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 DNAJC14Q6Y2X3 702 aaPredicted RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 NPM2Q86SE8 214 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 MAP4K3Q8IVH8 894 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 ARMC10Q8N2F6 343 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 EPS8L3Q8TE67 593 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 DMRTB1Q96MA1 342 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 DNAJC25Q9H1X3 360 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 SRA1Q9HD15 236 aaKnown RBP4.72□□□□□ -1.65
XRN1-209ENST00000472625 ATG3Q9NT62 314 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 PIM2Q9P1W9 311 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 POLKQ9UBT6 870 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 ASAP1Q9ULH1 1129 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 UBR3Q6ZT12 1888 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 TAF1LQ8IZX4 1826 aa4.72□□□□□ -1.65
XRN1-209ENST00000472625 C4AP0C0L4 1744 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms