RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 THSD7BQ9C0I4 1608 aa17.24■□□□□ 0.35
SMARCD3-207ENST00000472103 NT5C2P49902 561 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 GPAT2Q6NUI2 795 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 DNAJC5GQ8N7S2 189 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 UBAC1Q9BSL1 405 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 TM6SF1Q9BZW5 370 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 LY9Q9HBG7 655 aa17.23■□□□□ 0.35
SMARCD3-207ENST00000472103 CCL15-CCL14A0A0B4J2E2 113 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 TESPA1A2RU30 521 aaPredicted RBP17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 PSMA5P28066 241 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 GTF2A2P52657 109 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 CCL15Q16663 113 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 TMEM67Q5HYA8 995 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 TREML2Q5T2D2 321 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 RUFY3Q7L099 469 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 C12orf42Q96LP6 360 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 TTC14Q96N46 770 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
SMARCD3-207ENST00000472103 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 BTBD19C9JJ37 291 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 F5H6K3 240 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 NDUFB10O96000 172 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 TOP1P11387 765 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 KLRC3Q07444 240 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 NOGQ13253 232 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 WTAPQ15007 396 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 IFIT1BQ5T764 474 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 Q6ZUG5 572 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 TMEM87BQ96K49 555 aa17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 UPF2Q9HAU5 1272 aaKnown RBP17.21■□□□□ 0.35
SMARCD3-207ENST00000472103 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.34
SMARCD3-207ENST00000472103 MANSC4A6NHS7 340 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 RAD21O60216 631 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 HMGB1P09429 215 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 CETPP11597 493 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 VCAM1P19320 739 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 CCDC178Q5BJE1 867 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 LARP6Q9BRS8 491 aaKnown RBP17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 MTA3Q9BTC8 594 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 CYP46A1Q9Y6A2 500 aa17.2■□□□□ 0.34
SMARCD3-207ENST00000472103 USP14P54578 494 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 SLFN13Q68D06 897 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 RAB11FIP4Q86YS3 637 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 PROCA1Q8NCQ7 364 aaPredicted RBP17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 PNMA1Q8ND90 353 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 GMCL1P1Q8NEA9 526 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 MYL10Q9BUA6 226 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 SH2D4AQ9H788 454 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 KAT14Q9H8E8 782 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 TMOD4Q9NZQ9 345 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
SMARCD3-207ENST00000472103 RLFQ13129 1914 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 ERICH2A1L162 156 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 TM4SF4P48230 202 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 SART3Q15020 963 aaKnown RBP17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 IFNL1Q8IU54 200 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 BRF1Q92994 677 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 AGTPBP1Q9UPW5 1226 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 PARP14Q460N5 1801 aa17.18■□□□□ 0.34
SMARCD3-207ENST00000472103 SNHG28P0DPA3 235 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 PDHBP11177 359 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 RXRAP19793 462 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 MAP2K2P36507 400 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 LIFRP42702 1097 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 NEK4P51957 841 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 ANKRD23Q86SG2 305 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 SGMS1Q86VZ5 419 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 SYNPO2Q9UMS6 1093 aa17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
SMARCD3-207ENST00000472103 PDHXO00330 501 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 WDR46O15213 610 aaKnown RBP17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 AK2P54819 239 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 TTBK2Q6IQ55 1244 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 KCTD1Q719H9 257 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 ZNF654Q8IZM8 581 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 FBXL16Q8N461 479 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 LPAR1Q92633 364 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
SMARCD3-207ENST00000472103 SREBF2Q12772 1141 aa17.15■□□□□ 0.34
SMARCD3-207ENST00000472103 TROAPQ12815 778 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms