RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 HELLSQ9NRZ9 838 aa18■□□□□ 0.47
CALD1-215ENST00000472096 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
CALD1-215ENST00000472096 CLEC10AQ8IUN9 316 aa17.99■□□□□ 0.47
CALD1-215ENST00000472096 TRIM47Q96LD4 638 aa17.99■□□□□ 0.47
CALD1-215ENST00000472096 NAPBQ9H115 298 aa17.99■□□□□ 0.47
CALD1-215ENST00000472096 PLXNB2O15031 1838 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 A0A1W2PRG0 241 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 GALR2O43603 387 aaPredicted RBP17.98■□□□□ 0.47
CALD1-215ENST00000472096 GNRH1P01148 92 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 PSMC4P43686 418 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 GCLCP48506 637 aaPredicted RBP17.98■□□□□ 0.47
CALD1-215ENST00000472096 ICA1Q05084 483 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
CALD1-215ENST00000472096 FAM110CQ1W6H9 321 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 ANKRD13CQ8N6S4 541 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 TMEM106CQ9BVX2 250 aa17.98■□□□□ 0.47
CALD1-215ENST00000472096 VCAM1P19320 739 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 RASA1P20936 1047 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 MCMDC2Q4G0Z9 681 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 VPS53Q5VIR6 699 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 STK11IPQ8N1F8 1099 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 PTCH2Q9Y6C5 1203 aa17.97■□□□□ 0.47
CALD1-215ENST00000472096 COL11A1P12107 1806 aaPredicted RBP17.97■□□□□ 0.47
CALD1-215ENST00000472096 CENPFP49454 3210 aa17.96■□□□□ 0.47
CALD1-215ENST00000472096 SDSP20132 328 aa17.96■□□□□ 0.47
CALD1-215ENST00000472096 FCGRTP55899 365 aa17.96■□□□□ 0.47
CALD1-215ENST00000472096 HERVK_113P62684 666 aa17.96■□□□□ 0.47
CALD1-215ENST00000472096 ZNF589Q86UQ0 364 aaPredicted RBP17.96■□□□□ 0.47
CALD1-215ENST00000472096 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
CALD1-215ENST00000472096 CCDC171Q6TFL3 1326 aa17.96■□□□□ 0.46
CALD1-215ENST00000472096 PLIN4Q96Q06 1357 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 FMNL1O95466 1100 aaPredicted RBP17.95■□□□□ 0.46
CALD1-215ENST00000472096 PRMT2P55345 433 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 PPARAQ07869 468 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 EFCAB3Q8N7B9 438 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 P2RX7Q99572 595 aaKnown RBP17.95■□□□□ 0.46
CALD1-215ENST00000472096 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
CALD1-215ENST00000472096 SH2D4AQ9H788 454 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 MORF4L1Q9UBU8 362 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 SRRDQ9UH36 339 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
CALD1-215ENST00000472096 USP17L15C9J2P7 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L13C9JLJ4 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L11C9JVI0 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L18D6R9N7 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L22D6RA61 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L17D6RBQ6 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L19D6RCP7 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L20D6RJB6 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 PRDM1O75626 825 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 GSPT1P15170 499 aaKnown RBP17.94■□□□□ 0.46
CALD1-215ENST00000472096 USP17L24Q0WX57 530 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 GTF3C2Q8WUA4 911 aaPredicted RBP17.94■□□□□ 0.46
CALD1-215ENST00000472096 RPAP3Q9H6T3 665 aaPredicted RBP17.94■□□□□ 0.46
CALD1-215ENST00000472096 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 ZNF287Q9HBT7 754 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 TMX2Q9Y320 296 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 ZMYM6O95789 1325 aa17.94■□□□□ 0.46
CALD1-215ENST00000472096 KIAA0100Q14667 2235 aaKnown RBP17.93■□□□□ 0.46
CALD1-215ENST00000472096 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
CALD1-215ENST00000472096 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
CALD1-215ENST00000472096 HOXD10P28358 340 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 SOX10P56693 466 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 ALX1Q15699 326 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 KIAA1755Q5JYT7 1200 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 CATSPERGQ6ZRH7 1159 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 LPAR1Q92633 364 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 ARMC5Q96C12 935 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 VCPKMTQ9H867 229 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 TXNRD2Q9NNW7 524 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 DIAPH3Q9NSV4 1193 aa17.93■□□□□ 0.46
CALD1-215ENST00000472096 HIP1O00291 1037 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 TNPO2O14787 897 aaKnown RBP17.92■□□□□ 0.46
CALD1-215ENST00000472096 PEX10O60683 326 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 HSPD1P10809 573 aaKnown RBP17.92■□□□□ 0.46
CALD1-215ENST00000472096 PRKCZQ05513 592 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 PDE4BQ07343 736 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 POTEEQ6S8J3 1075 aa17.92■□□□□ 0.46
CALD1-215ENST00000472096 IGKV6D-41A0A0C4DH26 115 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 MFAP1P55081 439 aaKnown RBP17.91■□□□□ 0.46
CALD1-215ENST00000472096 ATP2B2Q01814 1243 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 CTDSPL2Q05D32 466 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 CWC27Q6UX04 472 aaKnown RBP17.91■□□□□ 0.46
CALD1-215ENST00000472096 LBX2Q6XYB7 198 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 ZNF444Q8N0Y2 327 aaPredicted RBP17.91■□□□□ 0.46
CALD1-215ENST00000472096 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 RBPJLQ9UBG7 517 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
CALD1-215ENST00000472096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
CALD1-215ENST00000472096 SPDYE16A6NNV3 312 aaPredicted RBP17.9■□□□□ 0.46
CALD1-215ENST00000472096 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
CALD1-215ENST00000472096 ERVK-9P63128 1117 aa17.9■□□□□ 0.46
CALD1-215ENST00000472096 ERVK-24P63145 666 aa17.9■□□□□ 0.46
CALD1-215ENST00000472096 SPICE1Q8N0Z3 855 aa17.9■□□□□ 0.46
CALD1-215ENST00000472096 RAET1EQ8TD07 263 aa17.9■□□□□ 0.46
CALD1-215ENST00000472096 ZNF333Q96JL9 665 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms