RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ERCC3P19447 782 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 CYP7A1P22680 504 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 DNAJB2P25686 324 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 COG2Q14746 738 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 CCDC158Q5M9N0 1113 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 FOCADQ5VW36 1801 aa23.24■■□□□ 1.31
SORT1-203ENST00000471996 CT47B1P0C2W7 299 aaPredicted RBP23.23■■□□□ 1.31
SORT1-203ENST00000471996 RAG1P15918 1043 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 USP5P45974 858 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 CDCA7LQ96GN5 454 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 GPR108Q9NPR9 543 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 PIH1D3Q9NQM4 214 aaKnown RBP23.23■■□□□ 1.31
SORT1-203ENST00000471996 ZNF236Q9UL36 1845 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 CDK5RAP2Q96SN8 1893 aa23.23■■□□□ 1.31
SORT1-203ENST00000471996 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 GUCY1A2P33402 732 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 ZAP70P43403 619 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 FPGSQ05932 587 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 TTC6Q86TZ1 520 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 CERS3Q8IU89 383 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 ABRAQ8N0Z2 381 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 MAML3Q96JK9 1138 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 ZNF512BQ96KM6 892 aaPredicted RBP23.22■■□□□ 1.31
SORT1-203ENST00000471996 ZNF576Q9H609 170 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 RAPGEFL1Q9UHV5 662 aa23.22■■□□□ 1.31
SORT1-203ENST00000471996 SHMT1P34896 483 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 TRMT2AQ8IZ69 625 aaKnown RBP23.21■■□□□ 1.31
SORT1-203ENST00000471996 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 MROH8Q9H579 483 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 XPNPEP3Q9NQH7 507 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
SORT1-203ENST00000471996 RARBP10826 455 aa23.2■■□□□ 1.3
SORT1-203ENST00000471996 MB21D1Q8N884 522 aa23.2■■□□□ 1.3
SORT1-203ENST00000471996 ATXN2LQ8WWM7 1075 aaKnown RBP23.2■■□□□ 1.3
SORT1-203ENST00000471996 TIFAQ96CG3 184 aa23.2■■□□□ 1.3
SORT1-203ENST00000471996 TMEM39AQ9NV64 488 aa23.2■■□□□ 1.3
SORT1-203ENST00000471996 NRBP1Q9UHY1 535 aa23.2■■□□□ 1.3
SORT1-203ENST00000471996 PQBP1O60828 265 aaKnown RBP23.19■■□□□ 1.3
SORT1-203ENST00000471996 GNAI2P04899 355 aa23.19■■□□□ 1.3
SORT1-203ENST00000471996 SEPT2Q15019 361 aa23.19■■□□□ 1.3
SORT1-203ENST00000471996 RNF180Q86T96 592 aa23.19■■□□□ 1.3
SORT1-203ENST00000471996 ARHGAP45Q92619 1136 aa23.19■■□□□ 1.3
SORT1-203ENST00000471996 TANGO6Q9C0B7 1094 aa23.19■■□□□ 1.3
SORT1-203ENST00000471996 A0A1W2PRG0 241 aa23.18■■□□□ 1.3
SORT1-203ENST00000471996 PLCD1P51178 756 aa23.18■■□□□ 1.3
SORT1-203ENST00000471996 NCAPG2Q86XI2 1143 aa23.18■■□□□ 1.3
SORT1-203ENST00000471996 A0A1W2PQ45 241 aaPredicted RBP23.17■■□□□ 1.3
SORT1-203ENST00000471996 A0A1W2PQY0 241 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 PGK1P00558 417 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 DSG3P32926 999 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 FAAP100Q0VG06 881 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 PLS1Q14651 629 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 TOX2Q96NM4 488 aa23.17■■□□□ 1.3
SORT1-203ENST00000471996 GAS2L1Q99501 681 aaPredicted RBP23.17■■□□□ 1.3
SORT1-203ENST00000471996 IDH1O75874 414 aaKnown RBP23.16■■□□□ 1.3
SORT1-203ENST00000471996 FCER1AP12319 257 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 PLA2G5P39877 138 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 GABPAQ06546 454 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 AKNAD1Q5T1N1 836 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 ANKRD33Q7Z3H0 272 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 PPM1EQ8WY54 764 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 ASB2Q96Q27 587 aa23.16■■□□□ 1.3
SORT1-203ENST00000471996 MAGEB6Q8N7X4 407 aa23.15■■□□□ 1.3
SORT1-203ENST00000471996 SLC44A5Q8NCS7 719 aa23.15■■□□□ 1.3
SORT1-203ENST00000471996 DCDC2CA8MYV0 355 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.29
SORT1-203ENST00000471996 KIAA1755Q5JYT7 1200 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 ADAMTS19Q8TE59 1207 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 ATG4CQ96DT6 458 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.14■■□□□ 1.29
SORT1-203ENST00000471996 THEGQ9P2T0 379 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 MYH1P12882 1939 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.29
SORT1-203ENST00000471996 MPHOSPH10O00566 681 aaKnown RBP23.13■■□□□ 1.29
SORT1-203ENST00000471996 FLOT1O75955 427 aa23.13■■□□□ 1.29
SORT1-203ENST00000471996 TIMP1P01033 207 aa23.13■■□□□ 1.29
SORT1-203ENST00000471996 TINF2Q9BSI4 451 aa23.13■■□□□ 1.29
SORT1-203ENST00000471996 TSEN34Q9BSV6 310 aaKnown RBP23.13■■□□□ 1.29
SORT1-203ENST00000471996 DBNLQ9UJU6 430 aaKnown RBP23.13■■□□□ 1.29
SORT1-203ENST00000471996 A0A0G2JMZ2 1700 aa23.13■■□□□ 1.29
SORT1-203ENST00000471996 SLC25A27O95847 323 aa23.12■■□□□ 1.29
SORT1-203ENST00000471996 POLR3DP05423 398 aaPredicted RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 ZNF865P0CJ78 1059 aaPredicted RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 TAL1P17542 331 aaPredicted RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 MRPS5P82675 430 aaKnown RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 OS9Q13438 667 aaPredicted RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 TMED8Q6PL24 325 aaPredicted RBP23.12■■□□□ 1.29
SORT1-203ENST00000471996 FAM122AQ96E09 287 aa23.12■■□□□ 1.29
SORT1-203ENST00000471996 PBX4Q9BYU1 374 aa23.12■■□□□ 1.29
SORT1-203ENST00000471996 PRDM12Q9H4Q4 367 aa23.12■■□□□ 1.29
SORT1-203ENST00000471996 STARD7Q9NQZ5 370 aa23.12■■□□□ 1.29
SORT1-203ENST00000471996 ADAMTS4O75173 837 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 AKR1A1P14550 325 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 PBX2P40425 430 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 POLA2Q14181 598 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 TMEM132BQ14DG7 1078 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 MFSD5Q6N075 450 aa23.11■■□□□ 1.29
SORT1-203ENST00000471996 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms