RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 ITGB7P26010 798 aa7.27□□□□□ -1.25
CDHR3-208ENST00000471910 HOXA10P31260 410 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-208ENST00000471910 PMS1P54277 932 aaKnown RBP7.27□□□□□ -1.25
CDHR3-208ENST00000471910 ZMYM1Q5SVZ6 1142 aa7.27□□□□□ -1.25
CDHR3-208ENST00000471910 NBPF12Q5TAG4 269 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-208ENST00000471910 TMEM192Q8IY95 271 aa7.27□□□□□ -1.25
CDHR3-208ENST00000471910 FAM169BQ8N8A8 192 aa7.27□□□□□ -1.25
CDHR3-208ENST00000471910 BSDC1Q9NW68 430 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-208ENST00000471910 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.25
CDHR3-208ENST00000471910 SSTR4P31391 388 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 CLCN7P51798 805 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 ZYXQ15942 572 aaKnown RBP7.26□□□□□ -1.25
CDHR3-208ENST00000471910 GNPTABQ3T906 1256 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 SOGA3Q5TF21 947 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 ANKS3Q6ZW76 656 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 CCDC144CPQ8IYA2 1237 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
CDHR3-208ENST00000471910 VWCEQ96DN2 955 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 MISP3Q96FF7 219 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 TRIT1Q9H3H1 467 aaKnown RBP7.26□□□□□ -1.25
CDHR3-208ENST00000471910 ZNF214Q9UL59 606 aaPredicted RBP7.26□□□□□ -1.25
CDHR3-208ENST00000471910 CAPN6Q9Y6Q1 641 aa7.26□□□□□ -1.25
CDHR3-208ENST00000471910 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 SLC7A5Q01650 507 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 FXNQ16595 210 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 CDKAL1Q5VV42 579 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 LARP1BQ659C4 914 aaKnown RBP7.25□□□□□ -1.25
CDHR3-208ENST00000471910 STK11IPQ8N1F8 1099 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 DHX38Q92620 1227 aaKnown RBP7.25□□□□□ -1.25
CDHR3-208ENST00000471910 ZNF512BQ96KM6 892 aaPredicted RBP7.25□□□□□ -1.25
CDHR3-208ENST00000471910 HRASLS5Q96KN8 279 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 TRIM55Q9BYV6 548 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 GPATCH2Q9NW75 528 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 FBXL21Q9UKT6 434 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 VAV3Q9UKW4 847 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 LTBP3Q9NS15 1303 aa7.25□□□□□ -1.25
CDHR3-208ENST00000471910 U2SURPO15042 1029 aaKnown RBP7.24□□□□□ -1.25
CDHR3-208ENST00000471910 LRRN2O75325 713 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 CD97P48960 835 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 PRKCQQ04759 706 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 TNK2Q07912 1038 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 NKPD1Q17RQ9 610 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 MSMPQ1L6U9 139 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 CLEC16AQ2KHT3 1053 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 VHLLQ6RSH7 139 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 SPACA3Q8IXA5 215 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 DTWD2Q8NBA8 298 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 ASB11Q8WXH4 323 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 Q96M66 194 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 TNKS2Q9H2K2 1166 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 PCMTD2Q9NV79 361 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 PLAGL2Q9UPG8 496 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 PCDHB12Q9Y5F1 795 aa7.24□□□□□ -1.25
CDHR3-208ENST00000471910 COL17A1Q9UMD9 1497 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-208ENST00000471910 TP53P04637 393 aaPredicted RBP7.23□□□□□ -1.25
CDHR3-208ENST00000471910 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
CDHR3-208ENST00000471910 NCAPHQ15003 741 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 TCEAL1Q15170 157 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 AOC3Q16853 763 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 NBPF9Q3BBW0 867 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 THAP5Q7Z6K1 395 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
CDHR3-208ENST00000471910 ANGEL1Q9UNK9 670 aaKnown RBP7.23□□□□□ -1.25
CDHR3-208ENST00000471910 SCO2A0A1W2PP80 73 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 H3BS24 57 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 DDAH1O94760 285 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 NAT2P11245 290 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 NBPF6Q5VWK0 638 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 TDRD10Q5VZ19 366 aaKnown RBP7.22□□□□□ -1.25
CDHR3-208ENST00000471910 DTX1Q86Y01 620 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
CDHR3-208ENST00000471910 HNRNPLLQ8WVV9 542 aaKnown RBP7.22□□□□□ -1.25
CDHR3-208ENST00000471910 UBXN4Q92575 508 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 NBPF4Q96M43 638 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 GPR62Q9BZJ7 368 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 ZSWIM5Q9P217 1185 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 SLC5A6Q9Y289 635 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 U3KQE9 123 aa7.22□□□□□ -1.25
CDHR3-208ENST00000471910 KIAA1324LA8MWY0 1029 aaPredicted RBP7.21□□□□□ -1.26
CDHR3-208ENST00000471910 C9IYK1 514 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 RBL2Q08999 1139 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 LRP8Q14114 963 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 NOL9Q5SY16 702 aaKnown RBP7.21□□□□□ -1.26
CDHR3-208ENST00000471910 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
CDHR3-208ENST00000471910 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 VSIG10LQ86VR7 867 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 UBE2FQ969M7 185 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 FAM86C1Q9NVL1 165 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 PCDHB10Q9UN67 800 aa7.21□□□□□ -1.26
CDHR3-208ENST00000471910 KLF4O43474 513 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 MED26O95402 600 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 WNT11O96014 354 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 PRNPP04156 253 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 SPINK2P20155 84 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 NMIQ13287 307 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-208ENST00000471910 RAB33AQ14088 237 aa7.2□□□□□ -1.26
CDHR3-208ENST00000471910 AXDND1Q5T1B0 1012 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms