RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 HELLSQ9NRZ9 838 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 DIAPH3Q9NSV4 1193 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 FLT3LGP49771 235 aa17.63■□□□□ 0.41
SSR4-208ENST00000471880 PPARAQ07869 468 aa17.63■□□□□ 0.41
SSR4-208ENST00000471880 MCMDC2Q4G0Z9 681 aa17.63■□□□□ 0.41
SSR4-208ENST00000471880 KANSL2Q9H9L4 492 aa17.63■□□□□ 0.41
SSR4-208ENST00000471880 TOMM22Q9NS69 142 aa17.63■□□□□ 0.41
SSR4-208ENST00000471880 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
SSR4-208ENST00000471880 RASA1P20936 1047 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 GRK4P32298 578 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 VPS53Q5VIR6 699 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 GTF3C2Q8WUA4 911 aaPredicted RBP17.62■□□□□ 0.41
SSR4-208ENST00000471880 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 GOPCQ9HD26 462 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 TXNRD2Q9NNW7 524 aa17.62■□□□□ 0.41
SSR4-208ENST00000471880 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 ADCY3O60266 1144 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 TSPY3P0CV98 308 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 TSPY8P0CW00 308 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 ELNP15502 786 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 SDSP20132 328 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 ERVK-9P63128 1117 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 ERVK-24P63145 666 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
SSR4-208ENST00000471880 OSBPL3Q9H4L5 887 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 VCPKMTQ9H867 229 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
SSR4-208ENST00000471880 COL11A1P12107 1806 aaPredicted RBP17.61■□□□□ 0.41
SSR4-208ENST00000471880 FLOT1O75955 427 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 PDE4AP27815 886 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 MFAP1P55081 439 aaKnown RBP17.6■□□□□ 0.41
SSR4-208ENST00000471880 UBXN2AP68543 259 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 PLS1Q14651 629 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 TMX2Q9Y320 296 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 CCDC171Q6TFL3 1326 aa17.6■□□□□ 0.41
SSR4-208ENST00000471880 A0A0G2JMZ2 1700 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 CCNA1P78396 465 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 COG2Q14746 738 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
SSR4-208ENST00000471880 KIAA1755Q5JYT7 1200 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 ZNF589Q86UQ0 364 aaPredicted RBP17.59■□□□□ 0.41
SSR4-208ENST00000471880 SIAH1Q8IUQ4 282 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 LPAR1Q92633 364 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 CHMP4CQ96CF2 233 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
SSR4-208ENST00000471880 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 SPDYE16A6NNV3 312 aaPredicted RBP17.58■□□□□ 0.4
SSR4-208ENST00000471880 HIP1O00291 1037 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 WDR46O15213 610 aaKnown RBP17.58■□□□□ 0.4
SSR4-208ENST00000471880 RANBP6O60518 1105 aaKnown RBP17.58■□□□□ 0.4
SSR4-208ENST00000471880 CYP2B6P20813 491 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 MAPK4P31152 587 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 HAND2P61296 217 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 TFAP4Q01664 338 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 MTFR1Q15390 333 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 Q3C1V9 767 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 PORCNQ9H237 461 aa17.58■□□□□ 0.4
SSR4-208ENST00000471880 FOXP2O15409 715 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
SSR4-208ENST00000471880 EN2P19622 333 aaPredicted RBP17.57■□□□□ 0.4
SSR4-208ENST00000471880 FAM83BQ5T0W9 1011 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 LRRC47Q8N1G4 583 aaKnown RBP17.57■□□□□ 0.4
SSR4-208ENST00000471880 CEP95Q96GE4 821 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 NUP88Q99567 741 aaPredicted RBP17.57■□□□□ 0.4
SSR4-208ENST00000471880 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.57■□□□□ 0.4
SSR4-208ENST00000471880 INCENPQ9NQS7 918 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 IVNS1ABPQ9Y6Y0 642 aa17.57■□□□□ 0.4
SSR4-208ENST00000471880 FGAP02671 866 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 TTC22Q5TAA0 569 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 PLEKHH3Q7Z736 793 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 NUDT12Q9BQG2 462 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 BTBD7Q9P203 1132 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 NYAP2Q9P242 653 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 MTMR7Q9Y216 660 aa17.56■□□□□ 0.4
SSR4-208ENST00000471880 CTDP1Q9Y5B0 961 aaPredicted RBP17.56■□□□□ 0.4
SSR4-208ENST00000471880 ZNFX1Q9P2E3 1918 aaKnown RBP17.55■□□□□ 0.4
SSR4-208ENST00000471880 CNMDO75829 334 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 TTLL1O95922 423 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 INHAP05111 366 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 CCL5P13501 91 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 GPR142Q7Z601 462 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 SOCS4Q8WXH5 440 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 FBXO28Q9NVF7 368 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 STX8Q9UNK0 236 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 CEP290O15078 2479 aa17.55■□□□□ 0.4
SSR4-208ENST00000471880 F5H6K3 240 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 GSPT1P15170 499 aaKnown RBP17.54■□□□□ 0.4
SSR4-208ENST00000471880 DSG3P32926 999 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms