RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 UBP1Q9NZI7 540 aa5.59□□□□□ -1.51
COPS3-206ENST00000471414 KCNH3Q9ULD8 1083 aa5.59□□□□□ -1.51
COPS3-206ENST00000471414 SHISA3A0PJX4 238 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 GLI1P08151 1106 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 CLCQ05315 142 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 KCNMB1Q16558 191 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 ATG4CQ96DT6 458 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 EAF1Q96JC9 268 aaPredicted RBP5.58□□□□□ -1.52
COPS3-206ENST00000471414 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 SLAMF8Q9P0V8 285 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 TMEM59LQ9UK28 342 aa5.58□□□□□ -1.52
COPS3-206ENST00000471414 RECKO95980 971 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 HPXP02790 462 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 CCNFP41002 786 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 ARSHQ5FYA8 562 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 CREG2Q8IUH2 290 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 PHACTR4Q8IZ21 702 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 TMEM87AQ8NBN3 555 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 KIRREL1Q96J84 757 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 BCL11AQ9H165 835 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 FAM53CQ9NYF3 392 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 DUSP13Q9UII6 198 aa5.57□□□□□ -1.52
COPS3-206ENST00000471414 TNFRSF10CO14798 259 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 ZGLP1P0C6A0 271 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 ZNF76P36508 570 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 JAG1P78504 1218 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 APOBRQ0VD83 1088 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 SEZ6Q53EL9 994 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 ZNF648Q5T619 568 aaPredicted RBP5.56□□□□□ -1.52
COPS3-206ENST00000471414 NBPF12Q5TAG4 269 aaPredicted RBP5.56□□□□□ -1.52
COPS3-206ENST00000471414 CILP2Q8IUL8 1156 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 BHLHE22Q8NFJ8 381 aaPredicted RBP5.56□□□□□ -1.52
COPS3-206ENST00000471414 ENOX1Q8TC92 643 aaKnown RBP5.56□□□□□ -1.52
COPS3-206ENST00000471414 LIN37Q96GY3 246 aaPredicted RBP5.56□□□□□ -1.52
COPS3-206ENST00000471414 HDAC8Q9BY41 377 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.56□□□□□ -1.52
COPS3-206ENST00000471414 ADAMTS10Q9H324 1103 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 PCDHA11Q9Y5I1 949 aa5.56□□□□□ -1.52
COPS3-206ENST00000471414 FARP2O94887 1054 aaPredicted RBP5.55□□□□□ -1.52
COPS3-206ENST00000471414 NME1P15531 152 aaKnown RBP5.55□□□□□ -1.52
COPS3-206ENST00000471414 POLR2BP30876 1174 aaKnown RBP5.55□□□□□ -1.52
COPS3-206ENST00000471414 TNNI2P48788 182 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 ERVFC1P60507 584 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 RNF4P78317 190 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 TEKQ02763 1124 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 MLECQ14165 292 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 NLRC3Q7RTR2 1065 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 TTC6Q86TZ1 520 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 KIAA0825Q8IV33 1275 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 SYTL5Q8TDW5 730 aaPredicted RBP5.55□□□□□ -1.52
COPS3-206ENST00000471414 ANTXR1Q9H6X2 564 aa5.55□□□□□ -1.52
COPS3-206ENST00000471414 LRRC10BA6NIK2 292 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 RAG1P15918 1043 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 GBP1P32455 592 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 ZNF165P49910 485 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 EGR3Q06889 387 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 RAD51AP2Q09MP3 1159 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 NR0B2Q15466 257 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 TMEM192Q8IY95 271 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 PDZD8Q8NEN9 1154 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 LINC01599Q8WXQ3 324 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 NKD1Q969G9 470 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 SPON2Q9BUD6 331 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 G6PC3Q9BUM1 346 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 EBF1Q9UH73 591 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 DDX41Q9UJV9 622 aaKnown RBP5.54□□□□□ -1.52
COPS3-206ENST00000471414 ZNRF3Q9ULT6 936 aa5.54□□□□□ -1.52
COPS3-206ENST00000471414 KRT1P04264 644 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 HK2P52789 917 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 RACK1P63244 317 aaKnown RBP5.53□□□□□ -1.52
COPS3-206ENST00000471414 NMIQ13287 307 aaPredicted RBP5.53□□□□□ -1.52
COPS3-206ENST00000471414 LRRFIP1Q32MZ4 808 aaKnown RBP5.53□□□□□ -1.52
COPS3-206ENST00000471414 ZNF394Q53GI3 561 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 TMEM67Q5HYA8 995 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 GK5Q6ZS86 529 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 USP48Q86UV5 1035 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 METTL16Q86W50 562 aaKnown RBP5.53□□□□□ -1.52
COPS3-206ENST00000471414 TAB3Q8N5C8 712 aaPredicted RBP5.53□□□□□ -1.52
COPS3-206ENST00000471414 DAGLBQ8NCG7 672 aa5.53□□□□□ -1.52
COPS3-206ENST00000471414 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 NOTOA8MTQ0 251 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 ACRP10323 421 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 MLANAQ16655 118 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 TIGD5Q53EQ6 642 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 INTS3Q68E01 1043 aaKnown RBP5.52□□□□□ -1.53
COPS3-206ENST00000471414 PRR23BQ6ZRT6 265 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 HOMEZQ8IX15 550 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 USHBP1Q8N6Y0 703 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 RBBP8NLQ8NC74 664 aaPredicted RBP5.52□□□□□ -1.53
COPS3-206ENST00000471414 ABHD4Q8TB40 342 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 MYLIPQ8WY64 445 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
COPS3-206ENST00000471414 KRTAP4-8A0A0G2JLE6 195 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 TMEM82A0PJX8 343 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 FITM1A5D6W6 292 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 RAC2P15153 192 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 LTKP29376 864 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 MCM4P33991 863 aa5.51□□□□□ -1.53
COPS3-206ENST00000471414 SNW1Q13573 536 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms