RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 AFAP1L2Q8N4X5 818 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 FANCD2OSQ96PS1 177 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 MRPL4Q9BYD3 311 aaKnown RBP9.07□□□□□ -0.96
SMC5-202ENST00000471372 MCM8Q9UJA3 840 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 MAPRE3Q9UPY8 281 aa9.07□□□□□ -0.96
SMC5-202ENST00000471372 PRODHO43272 600 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 TBX1O43435 398 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 NEFMP07197 916 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 EXOSC6Q5RKV6 272 aaKnown RBP9.06□□□□□ -0.96
SMC5-202ENST00000471372 CHSY3Q70JA7 882 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 STRA8Q7Z7C7 330 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 CCDC144CPQ8IYA2 1237 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 GABBR1Q9UBS5 961 aa9.06□□□□□ -0.96
SMC5-202ENST00000471372 CAPNS1P04632 268 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 FGFR1P11362 822 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 PABPC1P11940 636 aaKnown RBP9.05□□□□□ -0.96
SMC5-202ENST00000471372 SLBPQ14493 270 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMC5-202ENST00000471372 TTLL4Q14679 1199 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 CERS3Q8IU89 383 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 MAP4K3Q8IVH8 894 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 OSBP2Q969R2 916 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 ACDQ96AP0 544 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 COL25A1Q9BXS0 654 aaPredicted RBP9.05□□□□□ -0.96
SMC5-202ENST00000471372 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
SMC5-202ENST00000471372 CCDC194A0A1B0GVG4 234 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 SPDYE3A6NKU9 549 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 ALG1L2C9J202 215 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 DLL1O00548 723 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 NID1P14543 1247 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 PMLP29590 882 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 SUMO1P63165 101 aaKnown RBP9.04□□□□□ -0.96
SMC5-202ENST00000471372 KCNMA1Q12791 1236 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
SMC5-202ENST00000471372 ADAT2Q7Z6V5 191 aaKnown RBP9.04□□□□□ -0.96
SMC5-202ENST00000471372 ATL2Q8NHH9 583 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 CYB5D2Q8WUJ1 264 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
SMC5-202ENST00000471372 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMC5-202ENST00000471372 MAGEC2Q9UBF1 373 aaPredicted RBP9.04□□□□□ -0.96
SMC5-202ENST00000471372 AP4E1Q9UPM8 1137 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 ZNF451Q9Y4E5 1061 aa9.04□□□□□ -0.96
SMC5-202ENST00000471372 DNAJC25-GNG10A0A024R161 153 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 DNAJC8O75937 253 aaPredicted RBP9.03□□□□□ -0.96
SMC5-202ENST00000471372 WISP1O95388 367 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 CST3P01034 146 aaPredicted RBP9.03□□□□□ -0.96
SMC5-202ENST00000471372 CDC37L1Q7L3B6 337 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 XAGE3Q8WTP9 111 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 PRDM6Q9NQX0 595 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 INTS7Q9NVH2 962 aaKnown RBP9.03□□□□□ -0.96
SMC5-202ENST00000471372 SFMBT1Q9UHJ3 866 aa9.03□□□□□ -0.96
SMC5-202ENST00000471372 ALDH1L1O75891 902 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 C6orf222P0C671 652 aaPredicted RBP9.02□□□□□ -0.97
SMC5-202ENST00000471372 DUOXA2Q1HG44 320 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 BVESQ8NE79 360 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 LEO1Q8WVC0 666 aaPredicted RBP9.02□□□□□ -0.97
SMC5-202ENST00000471372 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.97
SMC5-202ENST00000471372 TSR2Q969E8 191 aaKnown RBP9.02□□□□□ -0.97
SMC5-202ENST00000471372 ISL2Q96A47 359 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 BTBD6Q96KE9 485 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 MKRN2Q9H000 416 aaKnown RBP9.02□□□□□ -0.97
SMC5-202ENST00000471372 ATXN3LQ9H3M9 355 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 TRIM39Q9HCM9 518 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 TCEAL9Q9UHQ7 104 aa9.02□□□□□ -0.97
SMC5-202ENST00000471372 SHOXO15266 292 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 EYA4O95677 639 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 GUCY2FP51841 1108 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 SRSF11Q05519 484 aaKnown RBP9.01□□□□□ -0.97
SMC5-202ENST00000471372 TTF1Q15361 905 aaPredicted RBP9.01□□□□□ -0.97
SMC5-202ENST00000471372 TRIM61Q5EBN2 209 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 WWC2Q6AWC2 1192 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 ADCY4Q8NFM4 1077 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 PPP1R13LQ8WUF5 828 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 MRGPRX3Q96LB0 322 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 GBP3Q9H0R5 595 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 NDOR1Q9UHB4 597 aa9.01□□□□□ -0.97
SMC5-202ENST00000471372 SHISA8B8ZZ34 492 aa9□□□□□ -0.97
SMC5-202ENST00000471372 RNF225M0QZC1 329 aaPredicted RBP9□□□□□ -0.97
SMC5-202ENST00000471372 KATNA1O75449 491 aa9□□□□□ -0.97
SMC5-202ENST00000471372 PPM1BO75688 479 aa9□□□□□ -0.97
SMC5-202ENST00000471372 ADH5P11766 374 aa9□□□□□ -0.97
SMC5-202ENST00000471372 CD247P20963 164 aa9□□□□□ -0.97
SMC5-202ENST00000471372 CAP2P40123 477 aa9□□□□□ -0.97
SMC5-202ENST00000471372 TBX4P57082 545 aa9□□□□□ -0.97
SMC5-202ENST00000471372 MAP7Q14244 749 aa9□□□□□ -0.97
SMC5-202ENST00000471372 PCBP1Q15365 356 aaKnown RBP eCLIP9□□□□□ -0.97
SMC5-202ENST00000471372 ANKRD39Q53RE8 183 aa9□□□□□ -0.97
SMC5-202ENST00000471372 DDX46Q7L014 1031 aaKnown RBP9□□□□□ -0.97
SMC5-202ENST00000471372 BRAPQ7Z569 592 aa9□□□□□ -0.97
SMC5-202ENST00000471372 FGD2Q7Z6J4 655 aa9□□□□□ -0.97
SMC5-202ENST00000471372 KCT2Q8NC54 265 aa9□□□□□ -0.97
SMC5-202ENST00000471372 RIN3Q8TB24 985 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms