RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
COL1A1-203ENST00000471344 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
COL1A1-203ENST00000471344 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.43■□□□□ 0.54
COL1A1-203ENST00000471344 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-203ENST00000471344 H0YGN5 161 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 TFRCP02786 760 aaKnown RBP18.42■□□□□ 0.54
COL1A1-203ENST00000471344 PRKAR2AP13861 404 aaKnown RBP18.42■□□□□ 0.54
COL1A1-203ENST00000471344 MX1P20591 662 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 ATP2B2Q01814 1243 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 WDR78Q5VTH9 848 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
COL1A1-203ENST00000471344 CRISPLD2Q9H0B8 497 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 ALPK3Q96L96 1907 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
COL1A1-203ENST00000471344 MINDY4BA8MYZ0 360 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 EEF2P13639 858 aaKnown RBP18.41■□□□□ 0.54
COL1A1-203ENST00000471344 RASA1P20936 1047 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-203ENST00000471344 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 ARHGEF10LQ9HCE6 1279 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 CWC22Q9HCG8 908 aaKnown RBP18.41■□□□□ 0.54
COL1A1-203ENST00000471344 FLRT1Q9NZU1 646 aa18.41■□□□□ 0.54
COL1A1-203ENST00000471344 COL11A1P12107 1806 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-203ENST00000471344 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 XRCC5P13010 732 aaKnown RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 RGS2P41220 211 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 SBK1Q52WX2 424 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 ANKRD45Q5TZF3 282 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 DPF3Q92784 378 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 ATG4CQ96DT6 458 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 APBA2Q99767 749 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 FSD1Q9BTV5 496 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-203ENST00000471344 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
COL1A1-203ENST00000471344 ERC2O15083 957 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 PRDM1O75626 825 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 FLOT1O75955 427 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 PTPREP23469 700 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 CCND3P30281 292 aaPredicted RBP18.39■□□□□ 0.53
COL1A1-203ENST00000471344 CCNA1P78396 465 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 MAP2K5Q13163 448 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 COG2Q14746 738 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 PAWRQ96IZ0 340 aaKnown RBP18.39■□□□□ 0.53
COL1A1-203ENST00000471344 MOV10L1Q9BXT6 1211 aaKnown RBP18.39■□□□□ 0.53
COL1A1-203ENST00000471344 FBXO28Q9NVF7 368 aa18.39■□□□□ 0.53
COL1A1-203ENST00000471344 FRMPD3Q5JV73 1810 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 DNAH12Q6ZR08 3092 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 FOXP2O15409 715 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 APPP05067 770 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 TDO2P48775 406 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 MNX1P50219 401 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-203ENST00000471344 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-203ENST00000471344 GRB14Q14449 540 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
COL1A1-203ENST00000471344 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 GIMAP6Q6P9H5 292 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 NPLOC4Q8TAT6 608 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 LPAR1Q92633 364 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
COL1A1-203ENST00000471344 COLQQ9Y215 455 aaPredicted RBP18.38■□□□□ 0.53
COL1A1-203ENST00000471344 ZNF236Q9UL36 1845 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 WDR46O15213 610 aaKnown RBP18.37■□□□□ 0.53
COL1A1-203ENST00000471344 RAD21O60216 631 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 DSG3P32926 999 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
COL1A1-203ENST00000471344 SH2D4AQ9H788 454 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 KANSL2Q9H9L4 492 aa18.37■□□□□ 0.53
COL1A1-203ENST00000471344 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 ERCC3P19447 782 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 PLS1Q14651 629 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 FAM83BQ5T0W9 1011 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 HOXC10Q9NYD6 342 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 MYH4Q9Y623 1939 aa18.36■□□□□ 0.53
COL1A1-203ENST00000471344 PATL2C9JE40 543 aaKnown RBP18.35■□□□□ 0.53
COL1A1-203ENST00000471344 GNAT2P19087 354 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 PDE1AP54750 535 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 TMEM132BQ14DG7 1078 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 EXOC6Q8TAG9 804 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 GCC1Q96CN9 775 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 HTATIP2Q9BUP3 242 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
COL1A1-203ENST00000471344 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 ADORA2AP29274 412 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 CYP2C19P33261 490 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 VPS53Q5VIR6 699 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 LHX8Q68G74 356 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
COL1A1-203ENST00000471344 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms