RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 ACRP10323 421 aa8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 TPP2P29144 1249 aaPredicted RBP8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 RALGPS1Q5JS13 557 aa8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
PRPF40A-206ENST00000471167 SCAMP3O14828 347 aaKnown RBP8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 C9orf131Q5VYM1 1079 aa8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 DIEXFQ68CQ4 756 aaKnown RBP8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 TMEM192Q8IY95 271 aa8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 SP110Q9HB58 689 aa8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.63□□□□□ -1.03
PRPF40A-206ENST00000471167 NME1P15531 152 aaKnown RBP8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 MCM4P33991 863 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 TNNI2P48788 182 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 ERVFC1P60507 584 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 SNW1Q13573 536 aaKnown RBP8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 NBPF12Q5TAG4 269 aaPredicted RBP8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 OGFOD2Q6N063 350 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 NLRC3Q7RTR2 1065 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 TMEM40Q8WWA1 233 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 SLC9A7Q96T83 725 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 ADAMTS10Q9H324 1103 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
PRPF40A-206ENST00000471167 ZNF503-AS2A6NEH8 195 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 RAG1P15918 1043 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 ZNF165P49910 485 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 TMPRSS7Q7RTY8 843 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 ASIC4Q96FT7 647 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 ASPNQ9BXN1 380 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 ZNRF3Q9ULT6 936 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 ZNF281Q9Y2X9 895 aa8.61□□□□□ -1.03
PRPF40A-206ENST00000471167 TNFRSF10CO14798 259 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 GBP1P32455 592 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 NBPF9Q3BBW0 867 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 CREG2Q8IUH2 290 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 FAM168AQ92567 244 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 PCDHA11Q9Y5I1 949 aa8.6□□□□□ -1.03
PRPF40A-206ENST00000471167 GDNFP39905 211 aa8.59□□□□□ -1.03
PRPF40A-206ENST00000471167 ZNF512BQ96KM6 892 aaPredicted RBP8.59□□□□□ -1.03
PRPF40A-206ENST00000471167 SLAMF8Q9P0V8 285 aa8.59□□□□□ -1.03
PRPF40A-206ENST00000471167 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
PRPF40A-206ENST00000471167 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
PRPF40A-206ENST00000471167 RAD51AP2Q09MP3 1159 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 PAK2Q13177 524 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 ZNF428Q96B54 188 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 DUSP13Q9UII6 198 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
PRPF40A-206ENST00000471167 BIN1O00499 593 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 RUFY4Q6ZNE9 571 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 NT5DC4Q86YG4 428 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 HDAC8Q9BY41 377 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 GOLGA2P5Q9HBQ8 144 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 GINM1Q9NU53 330 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 GPATCH2Q9NW75 528 aa8.57□□□□□ -1.04
PRPF40A-206ENST00000471167 TEKQ02763 1124 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 EGR3Q06889 387 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 MLECQ14165 292 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 ZYXQ15942 572 aaKnown RBP8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 TTC6Q86TZ1 520 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 USHBP1Q8N6Y0 703 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 SLC6A18Q96N87 628 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 TRIT1Q9H3H1 467 aaKnown RBP8.56□□□□□ -1.04
PRPF40A-206ENST00000471167 C9IYK1 514 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 EFEMP2O95967 443 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 ZGLP1P0C6A0 271 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 CCNFP41002 786 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 NMIQ13287 307 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 INTS3Q68E01 1043 aaKnown RBP8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 ZSWIM9Q86XI8 627 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 POU5F2Q8N7G0 328 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 RBBP8NLQ8NC74 664 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 G6PC3Q9BUM1 346 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 PRDM14Q9GZV8 571 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 TMEM59LQ9UK28 342 aa8.55□□□□□ -1.04
PRPF40A-206ENST00000471167 FAM86C2PA6NEL3 165 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 NOTOA8MTQ0 251 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 SHOXO15266 292 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 TRHRP34981 398 aaPredicted RBP8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 TXKP42681 527 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 LRRFIP1Q32MZ4 808 aaKnown RBP8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 TIGD5Q53EQ6 642 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
PRPF40A-206ENST00000471167 HPXP02790 462 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 HK2P52789 917 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 MESP2Q0VG99 397 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 LCE3BQ5TA77 95 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 RASGRP4Q8TDF6 673 aa8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 SYTL5Q8TDW5 730 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
PRPF40A-206ENST00000471167 TMEM82A0PJX8 343 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 CLEC3AO75596 197 aa8.52□□□□□ -1.05
PRPF40A-206ENST00000471167 PRAMEF1O95521 474 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms