RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 PFKFB3Q16875 520 aaPredicted RBP12.67□□□□□ -0.38
SND1-208ENST00000470463 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 FAM151AQ8WW52 585 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 KANSL2Q9H9L4 492 aa12.67□□□□□ -0.38
SND1-208ENST00000470463 TFIP11Q9UBB9 837 aaKnown RBP12.67□□□□□ -0.38
SND1-208ENST00000470463 MORC2Q9Y6X9 1032 aaPredicted RBP12.67□□□□□ -0.38
SND1-208ENST00000470463 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
SND1-208ENST00000470463 A0A1W2PQ27 194 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 A0A1W2PQ64 194 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 A0A1W2PQD8 194 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 PPP6R2O75170 966 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 SHMT1P34896 483 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 KRT2P35908 639 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 TNNI2P48788 182 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 FOSBP53539 338 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 EIF6P56537 245 aaKnown RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 TNFAIP1Q13829 316 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 STK38Q15208 465 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 ADALQ6DHV7 355 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 TATDN1Q6P1N9 297 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 TMEM179Q6ZVK1 233 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 FAM83AQ86UY5 434 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 DIS3L2Q8IYB7 885 aaKnown RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 DPF2Q92785 391 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 PHF20Q9BVI0 1012 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.66□□□□□ -0.38
SND1-208ENST00000470463 NMRK2Q9NPI5 230 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 NOL7Q9UMY1 257 aaKnown RBP12.66□□□□□ -0.38
SND1-208ENST00000470463 MYH15Q9Y2K3 1946 aa12.66□□□□□ -0.38
SND1-208ENST00000470463 CTAGE5O15320 804 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 GADD45BO75293 160 aaPredicted RBP12.65□□□□□ -0.38
SND1-208ENST00000470463 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 ME1P48163 572 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 EVX2Q03828 476 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 CXCL9Q07325 125 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 NFIAQ12857 509 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 PKN1Q16512 942 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 ANO1Q5XXA6 986 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 FAM173BQ6P4H8 233 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 CCDC73Q6ZRK6 1079 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 CCDC82Q8N4S0 544 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 SRBD1Q8N5C6 995 aaKnown RBP12.65□□□□□ -0.38
SND1-208ENST00000470463 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 PRMT6Q96LA8 375 aaPredicted RBP12.65□□□□□ -0.38
SND1-208ENST00000470463 USP28Q96RU2 1077 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
SND1-208ENST00000470463 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 TMEM63CQ9P1W3 806 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 SEC63Q9UGP8 760 aaKnown RBP12.65□□□□□ -0.38
SND1-208ENST00000470463 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
SND1-208ENST00000470463 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 SPTLC2O15270 562 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 TBC1D12O60347 775 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 DTNBO60941 627 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 TCP10Q12799 353 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 SLC39A14Q15043 492 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 COL13A1Q5TAT6 717 aaPredicted RBP12.64□□□□□ -0.39
SND1-208ENST00000470463 OTUD7BQ6GQQ9 843 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 TNS4Q8IZW8 715 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 ANP32BQ92688 251 aaKnown RBP12.64□□□□□ -0.39
SND1-208ENST00000470463 MKL1Q969V6 931 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
SND1-208ENST00000470463 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
SND1-208ENST00000470463 ZNF70Q9UC06 446 aaPredicted RBP12.64□□□□□ -0.39
SND1-208ENST00000470463 MYH8P13535 1937 aa12.64□□□□□ -0.39
SND1-208ENST00000470463 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
SND1-208ENST00000470463 NFKBIEO00221 500 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 MPHOSPH10O00566 681 aaKnown RBP12.63□□□□□ -0.39
SND1-208ENST00000470463 AKR1B1P15121 316 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 NLRP5P59047 1200 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 ZNF280AP59817 542 aaPredicted RBP12.63□□□□□ -0.39
SND1-208ENST00000470463 RBM26Q5T8P6 1007 aaKnown RBP12.63□□□□□ -0.39
SND1-208ENST00000470463 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 CSRNP1Q96S65 589 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 GINM1Q9NU53 330 aa12.63□□□□□ -0.39
SND1-208ENST00000470463 MYH6P13533 1939 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 FZD9O00144 591 aa12.62□□□□□ -0.39
SND1-208ENST00000470463 PDHBP11177 359 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms