RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 AKR1B1P15121 316 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 GUCY1A2P33402 732 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 ERVK-9P63128 1117 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 ERVK-24P63145 666 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 JAG1P78504 1218 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 ATP2B2Q01814 1243 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 SLFNL1Q499Z3 407 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 MKL1Q969V6 931 aa12.9□□□□□ -0.34
RFTN1-208ENST00000470458 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-208ENST00000470458 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-208ENST00000470458 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
RFTN1-208ENST00000470458 RAD50Q92878 1312 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 ORC4O43929 436 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 SLC25A27O95847 323 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 EEF2P13639 858 aaKnown RBP12.89□□□□□ -0.35
RFTN1-208ENST00000470458 RASA1P20936 1047 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 ZYXQ15942 572 aaKnown RBP12.89□□□□□ -0.35
RFTN1-208ENST00000470458 RCSD1Q6JBY9 416 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 SLC44A5Q8NCS7 719 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 SHCBP1Q8NEM2 672 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 ACER1Q8TDN7 264 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 MROH8Q9H579 483 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
RFTN1-208ENST00000470458 PTCH2Q9Y6C5 1203 aa12.89□□□□□ -0.35
RFTN1-208ENST00000470458 CYP2D7A0A087X1C5 515 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 TSPY2A6NKD2 308 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 ZNF213O14771 459 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 ADCY3O60266 1144 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 FLOT1O75955 427 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
RFTN1-208ENST00000470458 HSPD1P10809 573 aaKnown RBP12.88□□□□□ -0.35
RFTN1-208ENST00000470458 FLT3LGP49771 235 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 TFAP4Q01664 338 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 TTC22Q5TAA0 569 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 GMCL1P1Q8NEA9 526 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 TTC14Q96N46 770 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 SEC62Q99442 399 aaKnown RBP12.88□□□□□ -0.35
RFTN1-208ENST00000470458 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 KIAA0100Q14667 2235 aaKnown RBP12.88□□□□□ -0.35
RFTN1-208ENST00000470458 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
RFTN1-208ENST00000470458 FGAP02671 866 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 CHGBP05060 677 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 FGRP09769 529 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 RGS2P41220 211 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 NMIQ13287 307 aaPredicted RBP12.87□□□□□ -0.35
RFTN1-208ENST00000470458 IMMTQ16891 758 aaKnown RBP12.87□□□□□ -0.35
RFTN1-208ENST00000470458 ERICH6BQ5W0A0 696 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
RFTN1-208ENST00000470458 PRPF38AQ8NAV1 312 aaKnown RBP12.87□□□□□ -0.35
RFTN1-208ENST00000470458 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 ARHGAP39Q9C0H5 1083 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 EPB41L4AQ9HCS5 686 aaPredicted RBP12.87□□□□□ -0.35
RFTN1-208ENST00000470458 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
RFTN1-208ENST00000470458 RBBP6Q7Z6E9 1792 aaKnown RBP12.86□□□□□ -0.35
RFTN1-208ENST00000470458 A0A1W2PRG0 241 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 RAD21O60216 631 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
RFTN1-208ENST00000470458 DSG3P32926 999 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 PRKCZQ05513 592 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 ESR2Q92731 530 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 TCP11L1Q9NUJ3 509 aa12.86□□□□□ -0.35
RFTN1-208ENST00000470458 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 SPDYE16A6NNV3 312 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-208ENST00000470458 F5H6K3 240 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 ZBED4O75132 1171 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 HMGCRP04035 888 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 IRX6P78412 446 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-208ENST00000470458 KLRC3Q07444 240 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 TRDNQ13061 729 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 FAM160B2Q86V87 743 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 SLF1Q9BQI6 1058 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 KRT23Q9C075 422 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 ADAMTS5Q9UNA0 930 aa12.85□□□□□ -0.35
RFTN1-208ENST00000470458 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
RFTN1-208ENST00000470458 IGKV6D-41A0A0C4DH26 115 aa12.84□□□□□ -0.35
RFTN1-208ENST00000470458 PLA2G6O60733 806 aa12.84□□□□□ -0.35
RFTN1-208ENST00000470458 GJB1P08034 283 aa12.84□□□□□ -0.35
RFTN1-208ENST00000470458 OAZ1P54368 228 aa12.84□□□□□ -0.35
RFTN1-208ENST00000470458 SHROOM1Q2M3G4 852 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms