RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 CATSPERGQ6ZRH7 1159 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 RASGRP2Q7LDG7 609 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 OTOP1Q7RTM1 612 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 CTU1Q7Z7A3 348 aaKnown RBP8.11□□□□□ -1.11
PSMD4-210ENST00000470396 MKL1Q969V6 931 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 TRIM47Q96LD4 638 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 ESYT1Q9BSJ8 1104 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 LSG1Q9H089 658 aaKnown RBP8.11□□□□□ -1.11
PSMD4-210ENST00000470396 RPAP3Q9H6T3 665 aaPredicted RBP8.11□□□□□ -1.11
PSMD4-210ENST00000470396 VCPKMTQ9H867 229 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 NYAP2Q9P242 653 aa8.11□□□□□ -1.11
PSMD4-210ENST00000470396 PLXNB2O15031 1838 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
PSMD4-210ENST00000470396 ECM2O94769 699 aaPredicted RBP8.1□□□□□ -1.11
PSMD4-210ENST00000470396 USP14P54578 494 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 HERVK_113P62684 666 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 ATP2B2Q01814 1243 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 AKNAD1Q5T1N1 836 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 RCSD1Q6JBY9 416 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 STOX1Q6ZVD7 989 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 ZNF444Q8N0Y2 327 aaPredicted RBP8.1□□□□□ -1.11
PSMD4-210ENST00000470396 ANKRD13CQ8N6S4 541 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 MAP4K1Q92918 833 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 NUP88Q99567 741 aaPredicted RBP8.1□□□□□ -1.11
PSMD4-210ENST00000470396 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 FBXO28Q9NVF7 368 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 RBPJLQ9UBG7 517 aa8.1□□□□□ -1.11
PSMD4-210ENST00000470396 COL11A1P12107 1806 aaPredicted RBP8.1□□□□□ -1.11
PSMD4-210ENST00000470396 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L13C9JLJ4 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L11C9JVI0 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L18D6R9N7 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L22D6RA61 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L17D6RBQ6 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L19D6RCP7 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L20D6RJB6 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 RANBP6O60518 1105 aaKnown RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 TTLL1O95922 423 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 NDUFB10O96000 172 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 SLC3A2P08195 630 aaKnown RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 CYP21A2P08686 494 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 TSPY3P0CV98 308 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 TSPY8P0CW00 308 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 IRX3P78415 501 aaPredicted RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 USP17L24Q0WX57 530 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 FAM110CQ1W6H9 321 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 Q3C1V9 767 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 RRP12Q5JTH9 1297 aaKnown RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 LBX2Q6XYB7 198 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 LRRC47Q8N1G4 583 aaKnown RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 SMCR8Q8TEV9 937 aaPredicted RBP8.09□□□□□ -1.11
PSMD4-210ENST00000470396 RUFY2Q8WXA3 655 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 LPAR1Q92633 364 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 ERO1AQ96HE7 468 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 ZNF287Q9HBT7 754 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 BTBD7Q9P203 1132 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 PNMA3Q9UL41 463 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 TRIM17Q9Y577 477 aa8.09□□□□□ -1.11
PSMD4-210ENST00000470396 SMCHD1A6NHR9 2005 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 PDE4DIPQ5VU43 2346 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 TSPY2A6NKD2 308 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 B4E1Z4 1266 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 F5H6K3 240 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 ZNF213O14771 459 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 WDR46O15213 610 aaKnown RBP8.08□□□□□ -1.12
PSMD4-210ENST00000470396 KDM4AO75164 1064 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 OSBPP22059 807 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 PSMC4P43686 418 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 GCLCP48506 637 aaPredicted RBP8.08□□□□□ -1.12
PSMD4-210ENST00000470396 KLRC3Q07444 240 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 PABPC4Q13310 644 aaKnown RBP eCLIP8.08□□□□□ -1.12
PSMD4-210ENST00000470396 FAM83BQ5T0W9 1011 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 MFSD6Q6ZSS7 791 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 GMCL1P1Q8NEA9 526 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 REPS2Q8NFH8 660 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 ATG4CQ96DT6 458 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 TANGO6Q9C0B7 1094 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 PORCNQ9H237 461 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 TCP11L1Q9NUJ3 509 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 GABRQQ9UN88 632 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 ADAMTS5Q9UNA0 930 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 PTPN22Q9Y2R2 807 aa8.08□□□□□ -1.12
PSMD4-210ENST00000470396 RBM8AQ9Y5S9 174 aaKnown RBP8.08□□□□□ -1.12
PSMD4-210ENST00000470396 CDC45O75419 566 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 FLOT1O75955 427 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
PSMD4-210ENST00000470396 DSG3P32926 999 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 ANTXR2P58335 489 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 ERVK-9P63128 1117 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 ERVK-24P63145 666 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 PRKCZQ05513 592 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 COG2Q14746 738 aa8.07□□□□□ -1.12
PSMD4-210ENST00000470396 IMMTQ16891 758 aaKnown RBP8.07□□□□□ -1.12
PSMD4-210ENST00000470396 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
PSMD4-210ENST00000470396 CYB5R4Q7L1T6 521 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms