RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 SERPINB4P48594 390 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 TGFB2P61812 414 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 TLR1Q15399 786 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 PLA2G4EQ3MJ16 856 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 TNNI3KQ59H18 835 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 METTL24Q5JXM2 366 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 TSHZ3Q63HK5 1081 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 STYK1Q6J9G0 422 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 PRPF40BQ6NWY9 871 aaKnown RBP5.8□□□□□ -1.48
SF3B1-208ENST00000470268 SLC9A9Q8IVB4 645 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 C7orf43Q8WVR3 580 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 FHDC1Q9C0D6 1143 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-208ENST00000470268 IQSEC3Q9UPP2 1182 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-208ENST00000470268 DYRK1BQ9Y463 629 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 FPGT-TNNI3KV9GXZ4 949 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 KIAA1551Q9HCM1 1747 aa5.8□□□□□ -1.48
SF3B1-208ENST00000470268 A0A1B0GUL7 405 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ADAM23O75077 832 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 KLRK1P26718 216 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ALDH1B1P30837 517 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 PSMA6P60900 246 aaKnown RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 GPSM2P81274 684 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 CENPCQ03188 943 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 PRICKLE2Q7Z3G6 844 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ERC1Q8IUD2 1116 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 DBNDD2Q9BQY9 259 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 C2orf49Q9BVC5 232 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 CCDC8Q9H0W5 538 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.79□□□□□ -1.483e-16■■■■■ 119.2
SF3B1-208ENST00000470268 DBNLQ9UJU6 430 aaKnown RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ATP6V0A2Q9Y487 856 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 MROH5Q6ZUA9 1318 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 SNED1Q8TER0 1413 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 KIF13BQ9NQT8 1826 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 PPP1R12BO60237 982 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ADORA1P30542 326 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 RGS3P49796 1198 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 WDR44Q5JSH3 913 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 AACSQ86V21 672 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 TXNRD3Q86VQ6 643 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 SP8Q8IXZ3 490 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 CLASRPQ8N2M8 674 aaKnown RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 TTLL6Q8N841 843 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 GPR101Q96P66 508 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-208ENST00000470268 SYT17Q9BSW7 474 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 GPR108Q9NPR9 543 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 POLLQ9UGP5 575 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 CNTNAP5Q8WYK1 1306 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 IRS2Q9Y4H2 1338 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 ZNF609O15014 1411 aa5.79□□□□□ -1.48
SF3B1-208ENST00000470268 HIRAP54198 1017 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-208ENST00000470268 PDE1AP54750 535 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 PUM3Q15397 648 aaKnown RBP5.78□□□□□ -1.48
SF3B1-208ENST00000470268 ATP2B3Q16720 1220 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 ALYREFQ86V81 257 aaKnown RBP5.78□□□□□ -1.48
SF3B1-208ENST00000470268 ZNF295-AS1Q8N0V1 137 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 GTF3C2Q8WUA4 911 aaPredicted RBP5.78□□□□□ -1.48
SF3B1-208ENST00000470268 NEUROD6Q96NK8 337 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 DUOX1Q9NRD9 1551 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 PIM2Q9P1W9 311 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 SEPT3Q9UH03 358 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 SLX4Q8IY92 1834 aa5.78□□□□□ -1.48
SF3B1-208ENST00000470268 ZNF804BA4D1E1 1349 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 XDHP47989 1333 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 MEN1O00255 615 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ICMTO60725 284 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 IFIT2P09913 472 aaKnown RBP5.77□□□□□ -1.49
SF3B1-208ENST00000470268 RHOQP17081 205 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 MX1P20591 662 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 UBE4AQ14139 1066 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 TEAD4Q15561 434 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 DBN1Q16643 649 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 RIPOR1Q6ZS17 1223 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 TMC4Q7Z404 712 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 RGS22Q8NE09 1264 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 TBC1D16Q8TBP0 767 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 PI4K2BQ8TCG2 481 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 LPIN2Q92539 896 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 MKNK1Q9BUB5 465 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ANKIB1Q9P2G1 1089 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 SPEF2Q9C093 1822 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 LRRC37AA6NMS7 1700 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 UFL1O94874 794 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 GSPT1P15170 499 aaKnown RBP5.77□□□□□ -1.49
SF3B1-208ENST00000470268 PHKA1P46020 1223 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 GYG1P46976 350 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 DALRD3Q5D0E6 543 aaKnown RBP5.77□□□□□ -1.49
SF3B1-208ENST00000470268 CAPN12Q6ZSI9 719 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 VTI1AQ96AJ9 217 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ACDQ96AP0 544 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 FAM84BQ96KN1 310 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ZSCAN10Q96SZ4 725 aaPredicted RBP5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ANKRD2Q9GZV1 360 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 STAP2Q9UGK3 403 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 BCS1LQ9Y276 419 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 AKAP2Q9Y2D5 859 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 DLEC1Q9Y238 1755 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 LTBP1Q14766 1721 aa5.77□□□□□ -1.49
SF3B1-208ENST00000470268 ABL1P00519 1130 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms