RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 GPR62Q9BZJ7 368 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 ASCC2Q9H1I8 757 aaPredicted RBP6.85□□□□□ -1.31
ITGA6-209ENST00000470259 ADAMTS10Q9H324 1103 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.85□□□□□ -1.31
ITGA6-209ENST00000470259 TMEM59LQ9UK28 342 aa6.85□□□□□ -1.31
ITGA6-209ENST00000470259 GREM1O60565 184 aa6.84□□□□□ -1.31
ITGA6-209ENST00000470259 DNAJA2O60884 412 aa6.84□□□□□ -1.31
ITGA6-209ENST00000470259 ABHD4Q8TB40 342 aa6.84□□□□□ -1.31
ITGA6-209ENST00000470259 FAM84AQ96KN4 292 aa6.84□□□□□ -1.31
ITGA6-209ENST00000470259 ASPNQ9BXN1 380 aa6.84□□□□□ -1.31
ITGA6-209ENST00000470259 SLC22A31A6NKX4 558 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 APOBRQ0VD83 1088 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 FZD5Q13467 585 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 GK5Q6ZS86 529 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 MYLIPQ8WY64 445 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 UBP1Q9NZI7 540 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 ADAMTS1Q9UHI8 967 aa6.83□□□□□ -1.32
ITGA6-209ENST00000470259 RGS13O14921 159 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 SRFP11831 508 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 ZNF16P17020 682 aaPredicted RBP6.82□□□□□ -1.32
ITGA6-209ENST00000470259 CRKP46108 304 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 ERVFC1P60507 584 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 GAB4Q2WGN9 574 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 DIRC2Q96SL1 478 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 KCNQ5Q9NR82 932 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 GMIPQ9P107 970 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 PCDHA11Q9Y5I1 949 aa6.82□□□□□ -1.32
ITGA6-209ENST00000470259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.81□□□□□ -1.32
ITGA6-209ENST00000470259 RNF4P78317 190 aa6.81□□□□□ -1.32
ITGA6-209ENST00000470259 DHX38Q92620 1227 aaKnown RBP6.81□□□□□ -1.32
ITGA6-209ENST00000470259 NKD1Q969G9 470 aa6.81□□□□□ -1.32
ITGA6-209ENST00000470259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.81□□□□□ -1.32
ITGA6-209ENST00000470259 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 ATE1O95260 518 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 ZNF165P49910 485 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 MFAP1P55081 439 aaKnown RBP6.8□□□□□ -1.32
ITGA6-209ENST00000470259 MESP2Q0VG99 397 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 OVOS1Q6IE37 1185 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 SPON2Q9BUD6 331 aa6.8□□□□□ -1.32
ITGA6-209ENST00000470259 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
ITGA6-209ENST00000470259 UBOX5O94941 541 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 POLR2BP30876 1174 aaKnown RBP6.79□□□□□ -1.32
ITGA6-209ENST00000470259 TRHRP34981 398 aaPredicted RBP6.79□□□□□ -1.32
ITGA6-209ENST00000470259 ZNF76P36508 570 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 CLCQ05315 142 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 KIAA0825Q8IV33 1275 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 OXR1Q8N573 874 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 EHMT1Q9H9B1 1298 aa6.79□□□□□ -1.32
ITGA6-209ENST00000470259 SSU72P8A0A1W2PR75 194 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 RBM47A0AV96 593 aaKnown RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 HPXP02790 462 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 ZGLP1P0C6A0 271 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 JAG1P78504 1218 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 RAD51AP2Q09MP3 1159 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 NMIQ13287 307 aaPredicted RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 LRRFIP1Q32MZ4 808 aaKnown RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 SYDE1Q6ZW31 735 aaPredicted RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 NLRC3Q7RTR2 1065 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 REXO1Q8N1G1 1221 aaKnown RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 PDZD8Q8NEN9 1154 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 ATG4CQ96DT6 458 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 NT5C1AQ9BXI3 368 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 BACH2Q9BYV9 841 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 C19orf44Q9H6X5 657 aa6.78□□□□□ -1.32
ITGA6-209ENST00000470259 DCP1AQ9NPI6 582 aaPredicted RBP6.78□□□□□ -1.32
ITGA6-209ENST00000470259 DBX1A6NMT0 343 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 CLEC3AO75596 197 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 RPL10P27635 214 aaKnown RBP6.77□□□□□ -1.33
ITGA6-209ENST00000470259 RAP1GAPP47736 663 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 NBPF12Q5TAG4 269 aaPredicted RBP6.77□□□□□ -1.33
ITGA6-209ENST00000470259 CDCP2Q5VXM1 449 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 USP48Q86UV5 1035 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 SPPL2CQ8IUH8 684 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
ITGA6-209ENST00000470259 ENOX1Q8TC92 643 aaKnown RBP6.77□□□□□ -1.33
ITGA6-209ENST00000470259 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
ITGA6-209ENST00000470259 PPP1R16BQ96T49 567 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 CNNM2Q9H8M5 875 aa6.77□□□□□ -1.33
ITGA6-209ENST00000470259 FITM1A5D6W6 292 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 DUSP4Q13115 394 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 VWCEQ96DN2 955 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 EAF1Q96JC9 268 aaPredicted RBP6.76□□□□□ -1.33
ITGA6-209ENST00000470259 RNF32Q9H0A6 362 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 EPB41L4BQ9H329 900 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 ANTXR1Q9H6X2 564 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 ZMYM5Q9UJ78 669 aa6.76□□□□□ -1.33
ITGA6-209ENST00000470259 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
ITGA6-209ENST00000470259 TEKQ02763 1124 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 NBPF9Q3BBW0 867 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 TMC3Q7Z5M5 1100 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 SLITRK4Q8IW52 837 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 LILRA2Q8N149 483 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 SYTL5Q8TDW5 730 aaPredicted RBP6.75□□□□□ -1.33
ITGA6-209ENST00000470259 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 FOXP3Q9BZS1 431 aa6.75□□□□□ -1.33
ITGA6-209ENST00000470259 MKRN2Q9H000 416 aaKnown RBP6.75□□□□□ -1.33
ITGA6-209ENST00000470259 KCNK12Q9HB15 430 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms