RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 DTWD2Q8NBA8 298 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 SEC16BQ96JE7 1060 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 TM9SF2Q99805 663 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 KRTAP9-2Q9BYQ4 174 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 CAPN10Q9HC96 672 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 SEMA3GQ9NS98 782 aa6.44□□□□□ -1.38
BRCA2-202ENST00000470094 COL17A1Q9UMD9 1497 aaPredicted RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 LRRN2O75325 713 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 CLEC3AO75596 197 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 EIF6P56537 245 aaKnown RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 LSRQ86X29 649 aaPredicted RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 VPS37DQ86XT2 251 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 ABI1Q8IZP0 508 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 TAB3Q8N5C8 712 aaPredicted RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 RBBP8NLQ8NC74 664 aaPredicted RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 CPLX3Q8WVH0 158 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 UBE2FQ969M7 185 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 SLC9A7Q96T83 725 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 SRRTQ9BXP5 876 aaKnown RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 TRIT1Q9H3H1 467 aaKnown RBP6.43□□□□□ -1.38
BRCA2-202ENST00000470094 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 ZSWIM5Q9P217 1185 aa6.43□□□□□ -1.38
BRCA2-202ENST00000470094 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 FUT4P22083 530 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 INTS3Q68E01 1043 aaKnown RBP6.42□□□□□ -1.38
BRCA2-202ENST00000470094 DHRS1Q96LJ7 313 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 SLC6A18Q96N87 628 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 IGSF5Q9NSI5 407 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 GPATCH2Q9NW75 528 aa6.42□□□□□ -1.38
BRCA2-202ENST00000470094 FAM86C2PA6NEL3 165 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 GUCY2CP25092 1073 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 ZP2Q05996 745 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 NBPF12Q5TAG4 269 aaPredicted RBP6.41□□□□□ -1.38
BRCA2-202ENST00000470094 TMPRSS7Q7RTY8 843 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 TMEM192Q8IY95 271 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 OR6P1Q8NGX9 317 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 PI4K2BQ8TCG2 481 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 VWCEQ96DN2 955 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 GPR62Q9BZJ7 368 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 MKRN2Q9H000 416 aaKnown RBP6.41□□□□□ -1.38
BRCA2-202ENST00000470094 ASCC2Q9H1I8 757 aaPredicted RBP6.41□□□□□ -1.38
BRCA2-202ENST00000470094 STRIP2Q9ULQ0 834 aa6.41□□□□□ -1.38
BRCA2-202ENST00000470094 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 ACRP10323 421 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 ATF4P18848 351 aaPredicted RBP6.4□□□□□ -1.38
BRCA2-202ENST00000470094 TPP2P29144 1249 aaPredicted RBP6.4□□□□□ -1.38
BRCA2-202ENST00000470094 GIPRP48546 466 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 IRAK1P51617 712 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 CLEC16AQ2KHT3 1053 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 RUFY4Q6ZNE9 571 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 ZNF512BQ96KM6 892 aaPredicted RBP6.4□□□□□ -1.38
BRCA2-202ENST00000470094 DUSP15Q9H1R2 295 aaPredicted RBP6.4□□□□□ -1.38
BRCA2-202ENST00000470094 LMCD1Q9NZU5 365 aa6.4□□□□□ -1.38
BRCA2-202ENST00000470094 SRFP11831 508 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 ZNF792Q3KQV3 632 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 TSPYL5Q86VY4 417 aaPredicted RBP6.39□□□□□ -1.39
BRCA2-202ENST00000470094 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 CARS2Q9HA77 564 aaKnown RBP6.39□□□□□ -1.39
BRCA2-202ENST00000470094 SUCOQ9UBS9 1254 aaKnown RBP6.39□□□□□ -1.39
BRCA2-202ENST00000470094 ADGRE2Q9UHX3 823 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
BRCA2-202ENST00000470094 NMIQ13287 307 aaPredicted RBP6.38□□□□□ -1.39
BRCA2-202ENST00000470094 NBPF9Q3BBW0 867 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 UNC5AQ6ZN44 842 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 ANAPC16Q96DE5 110 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 SHDQ96IW2 340 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
BRCA2-202ENST00000470094 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
BRCA2-202ENST00000470094 SHISA3A0PJX4 238 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 WASH4PA8MWX3 477 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 SSBP05455 408 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 RNASE1P07998 156 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 LTKP29376 864 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 PMS1P54277 932 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 ARID5AQ03989 594 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 ZYXQ15942 572 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 PPP2R5EQ16537 467 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 GAB4Q2WGN9 574 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 BBS9Q3SYG4 887 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 TTC6Q86TZ1 520 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 CCDC144CPQ8IYA2 1237 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 C19orf47Q8N9M1 422 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 SMARCC1Q92922 1105 aaPredicted RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
BRCA2-202ENST00000470094 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 FBXL21Q9UKT6 434 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 PCDHB12Q9Y5F1 795 aa6.37□□□□□ -1.39
BRCA2-202ENST00000470094 ESR1P03372 595 aa6.36□□□□□ -1.39
BRCA2-202ENST00000470094 SNW1Q13573 536 aaKnown RBP6.36□□□□□ -1.39
BRCA2-202ENST00000470094 TDRD10Q5VZ19 366 aaKnown RBP6.36□□□□□ -1.39
BRCA2-202ENST00000470094 CBLL1Q75N03 491 aa6.36□□□□□ -1.39
BRCA2-202ENST00000470094 TMC3Q7Z5M5 1100 aa6.36□□□□□ -1.39
BRCA2-202ENST00000470094 SYTL5Q8TDW5 730 aaPredicted RBP6.36□□□□□ -1.39
BRCA2-202ENST00000470094 DNAJA1P31689 397 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms