RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 IVNS1ABPQ9Y6Y0 642 aa21.07■□□□□ 0.96
COL7A1-208ENST00000470076 C12orf60Q5U649 245 aa21.06■□□□□ 0.96
COL7A1-208ENST00000470076 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
COL7A1-208ENST00000470076 C11orf49Q9H6J7 331 aa21.06■□□□□ 0.96
COL7A1-208ENST00000470076 SH2D4AQ9H788 454 aa21.06■□□□□ 0.96
COL7A1-208ENST00000470076 ARHGEF10LQ9HCE6 1279 aa21.06■□□□□ 0.96
COL7A1-208ENST00000470076 A0A1W2PPC1 479 aa21.05■□□□□ 0.96
COL7A1-208ENST00000470076 HOXC6P09630 235 aa21.05■□□□□ 0.96
COL7A1-208ENST00000470076 LPAR1Q92633 364 aa21.05■□□□□ 0.96
COL7A1-208ENST00000470076 TANGO6Q9C0B7 1094 aa21.05■□□□□ 0.96
COL7A1-208ENST00000470076 SZT2Q5T011 3432 aa21.05■□□□□ 0.96
COL7A1-208ENST00000470076 RLFQ13129 1914 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 USP17L12C9JPN9 530 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 USP17L21D6R901 530 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 SMARCA5O60264 1052 aaPredicted RBP21.04■□□□□ 0.96
COL7A1-208ENST00000470076 AKR1B1P15121 316 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 CCND3P30281 292 aaPredicted RBP21.04■□□□□ 0.96
COL7A1-208ENST00000470076 ICA1Q05084 483 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 GRB14Q14449 540 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 MFSD14CQ5VZR4 134 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 ECHDC1Q9NTX5 307 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 TMX2Q9Y320 296 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
COL7A1-208ENST00000470076 CHGBP05060 677 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 CDK8P49336 464 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 LHX8Q68G74 356 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 C16orf86Q6ZW13 317 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 MB21D1Q8N884 522 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 A0A0G2JMZ2 1700 aa21.03■□□□□ 0.96
COL7A1-208ENST00000470076 CYP2D7A0A087X1C5 515 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 STRNO43815 780 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 ATP2B2Q01814 1243 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 SIAH1Q8IUQ4 282 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 C7orf61Q8IZ16 206 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 SHCBP1Q8NEM2 672 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 GPATCH3Q96I76 525 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 MOV10L1Q9BXT6 1211 aaKnown RBP21.02■□□□□ 0.96
COL7A1-208ENST00000470076 PUS7LQ9H0K6 701 aaKnown RBP21.02■□□□□ 0.96
COL7A1-208ENST00000470076 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 VCPKMTQ9H867 229 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 FLRT1Q9NZU1 646 aa21.02■□□□□ 0.96
COL7A1-208ENST00000470076 ZNF236Q9UL36 1845 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 DSG3P32926 999 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 CLEC10AQ8IUN9 316 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 SPATC1LQ9H0A9 340 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 STAP2Q9UGK3 403 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 FRMPD3Q5JV73 1810 aa21.01■□□□□ 0.95
COL7A1-208ENST00000470076 SMIM22K7EJ46 135 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 WDR46O15213 610 aaKnown RBP21■□□□□ 0.95
COL7A1-208ENST00000470076 FLOT1O75955 427 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 COL6A1P12109 1028 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 CTR9Q6PD62 1173 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 SPICE1Q8N0Z3 855 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 KANSL2Q9H9L4 492 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 ARPP21Q9UBL0 812 aaPredicted RBP21■□□□□ 0.95
COL7A1-208ENST00000470076 PFASO15067 1338 aa21■□□□□ 0.95
COL7A1-208ENST00000470076 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 MSCO60682 206 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 DPP9Q86TI2 863 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 KBTBD3Q8NAB2 608 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 NPLOC4Q8TAT6 608 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 GDF15Q99988 308 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 MROH8Q9H579 483 aa20.99■□□□□ 0.95
COL7A1-208ENST00000470076 ERCC3P19447 782 aa20.98■□□□□ 0.95
COL7A1-208ENST00000470076 ADORA2AP29274 412 aa20.98■□□□□ 0.95
COL7A1-208ENST00000470076 BMP8BP34820 402 aa20.98■□□□□ 0.95
COL7A1-208ENST00000470076 GIMAP6Q6P9H5 292 aa20.98■□□□□ 0.95
COL7A1-208ENST00000470076 STRBPQ96SI9 672 aaKnown RBP20.98■□□□□ 0.95
COL7A1-208ENST00000470076 DDX20Q9UHI6 824 aaKnown RBP20.98■□□□□ 0.95
COL7A1-208ENST00000470076 ZMYND8Q9ULU4 1186 aaPredicted RBP20.98■□□□□ 0.95
COL7A1-208ENST00000470076 LAMA3Q16787 3333 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 IGHA2P01877 340 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 EEF2P13639 858 aaKnown RBP20.97■□□□□ 0.95
COL7A1-208ENST00000470076 CYP2C19P33261 490 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 PLS1Q14651 629 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 SBK1Q52WX2 424 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 OLFML2BQ68BL8 750 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 ABRAQ8N0Z2 381 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 ATG4CQ96DT6 458 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 SLC5A4Q9NY91 659 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 DNAH12Q6ZR08 3092 aa20.97■□□□□ 0.95
COL7A1-208ENST00000470076 ZFYP08048 801 aaPredicted RBP20.96■□□□□ 0.95
COL7A1-208ENST00000470076 CNGA1P29973 690 aa20.96■□□□□ 0.95
COL7A1-208ENST00000470076 APPBP2Q92624 585 aa20.96■□□□□ 0.95
COL7A1-208ENST00000470076 GOPCQ9HD26 462 aa20.96■□□□□ 0.95
COL7A1-208ENST00000470076 GSG1L2A8MUP6 293 aa20.95■□□□□ 0.94
COL7A1-208ENST00000470076 CYBAP13498 195 aa20.95■□□□□ 0.94
COL7A1-208ENST00000470076 NCAPG2Q86XI2 1143 aa20.95■□□□□ 0.94
COL7A1-208ENST00000470076 OSBP2Q969R2 916 aa20.95■□□□□ 0.94
COL7A1-208ENST00000470076 ADAMTS5Q9UNA0 930 aa20.95■□□□□ 0.94
COL7A1-208ENST00000470076 GREB1LQ9C091 1923 aaPredicted RBP20.95■□□□□ 0.94
COL7A1-208ENST00000470076 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
COL7A1-208ENST00000470076 RNF113AO15541 343 aaKnown RBP20.94■□□□□ 0.94
COL7A1-208ENST00000470076 SLC25A27O95847 323 aa20.94■□□□□ 0.94
COL7A1-208ENST00000470076 SYN1P17600 705 aa20.94■□□□□ 0.94
COL7A1-208ENST00000470076 LRRFIP1Q32MZ4 808 aaKnown RBP20.94■□□□□ 0.94
COL7A1-208ENST00000470076 ZNFX1Q9P2E3 1918 aaKnown RBP20.94■□□□□ 0.94
COL7A1-208ENST00000470076 COBLO75128 1261 aa20.93■□□□□ 0.94
COL7A1-208ENST00000470076 FCER1AP12319 257 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms