RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 DPP9Q86TI2 863 aa14.05□□□□□ -0.16
COMMD2-202ENST00000469896 DZIP1Q86YF9 867 aaKnown RBP14.05□□□□□ -0.16
COMMD2-202ENST00000469896 ZGPATQ8N5A5 531 aaKnown RBP14.05□□□□□ -0.16
COMMD2-202ENST00000469896 VGLL2Q8N8G2 317 aa14.05□□□□□ -0.16
COMMD2-202ENST00000469896 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.16
COMMD2-202ENST00000469896 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
COMMD2-202ENST00000469896 DDX4Q9NQI0 724 aaKnown RBP14.05□□□□□ -0.16
COMMD2-202ENST00000469896 GAKO14976 1311 aa14.05□□□□□ -0.16
COMMD2-202ENST00000469896 SALL1Q9NSC2 1324 aa14.05□□□□□ -0.16
COMMD2-202ENST00000469896 ZDBF2Q9HCK1 2354 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 FAM205CA6NFA0 338 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 USP17L10C9JJH3 530 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 LRRC24Q50LG9 513 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 BEND3Q5T5X7 828 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 ANKRD33Q7Z3H0 272 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 TMEM199Q8N511 208 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 HLA-CQ95604 372 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 SLC5A4Q9NY91 659 aa14.04□□□□□ -0.16
COMMD2-202ENST00000469896 HERC5Q9UII4 1024 aaKnown RBP14.04□□□□□ -0.16
COMMD2-202ENST00000469896 APBB1O00213 710 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 RARBP10826 455 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 ALADP13716 330 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 FAAP100Q0VG06 881 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 FAM47AQ5JRC9 791 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 CCER1Q8TC90 406 aaPredicted RBP14.03□□□□□ -0.16
COMMD2-202ENST00000469896 LPIN2Q92539 896 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 FBXL18Q96ME1 805 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 XPNPEP3Q9NQH7 507 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 ZNF521Q96K83 1311 aa14.03□□□□□ -0.16
COMMD2-202ENST00000469896 A0A1W2PQ45 241 aaPredicted RBP14.02□□□□□ -0.17
COMMD2-202ENST00000469896 A0A1W2PQY0 241 aa14.02□□□□□ -0.17
COMMD2-202ENST00000469896 BTDP43251 543 aa14.02□□□□□ -0.17
COMMD2-202ENST00000469896 RALBP1Q15311 655 aa14.02□□□□□ -0.17
COMMD2-202ENST00000469896 DENND2AQ9ULE3 1009 aa14.02□□□□□ -0.17
COMMD2-202ENST00000469896 REV3LO60673 3130 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 MROH7Q68CQ1 1323 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 SEMA3EO15041 775 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 IGHA2P01877 340 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 FGFR2P21802 821 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 ZNF365Q70YC5 407 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 C16orf59Q7L2K0 433 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 TBX21Q9UL17 535 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 ADAMTS8Q9UP79 889 aa14.01□□□□□ -0.17
COMMD2-202ENST00000469896 STRNO43815 780 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 CSF2RAP15509 400 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 POU3F3P20264 500 aaPredicted RBP14□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L2Q6R6M4 530 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 GINM1Q9NU53 330 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 YBX2Q9Y2T7 364 aaKnown RBP14□□□□□ -0.17
COMMD2-202ENST00000469896 LRRC37A2A6NM11 1700 aa14□□□□□ -0.17
COMMD2-202ENST00000469896 WDFY4Q6ZS81 3184 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 F6X3S4 739 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 CNMDO75829 334 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 MAP4K4O95819 1239 aaPredicted RBP13.99□□□□□ -0.17
COMMD2-202ENST00000469896 ACRP10323 421 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 ADORA2AP29274 412 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 SPTY2D1Q68D10 685 aaPredicted RBP13.99□□□□□ -0.17
COMMD2-202ENST00000469896 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
COMMD2-202ENST00000469896 MTCH2Q9Y6C9 303 aa13.99□□□□□ -0.17
COMMD2-202ENST00000469896 TRANK1O15050 2925 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 MROH7-TTC4A0A0A0MT08 1334 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 APAF1O14727 1248 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 RRP1BQ14684 758 aaKnown RBP13.98□□□□□ -0.17
COMMD2-202ENST00000469896 GJD3Q8N144 294 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 SUCLG2Q96I99 432 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 TSEN34Q9BSV6 310 aaKnown RBP13.98□□□□□ -0.17
COMMD2-202ENST00000469896 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 KRTAP3-3Q9BYR6 98 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 KRTAP3-2Q9BYR7 98 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 PI4KBQ9UBF8 816 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
COMMD2-202ENST00000469896 PRRC2BQ5JSZ5 2229 aaKnown RBP13.98□□□□□ -0.17
COMMD2-202ENST00000469896 PGK1P00558 417 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 FGBP02675 491 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
COMMD2-202ENST00000469896 PRAMEF19Q5SWL8 479 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 FEZ1Q99689 392 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 IL23AQ9NPF7 189 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 ABCF2Q9UG63 623 aa13.97□□□□□ -0.17
COMMD2-202ENST00000469896 MYH13Q9UKX3 1938 aa13.96□□□□□ -0.17
COMMD2-202ENST00000469896 GPR75-ASB3A0A0A6YYF3 556 aa13.96□□□□□ -0.17
COMMD2-202ENST00000469896 RHBDL3P58872 404 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms