RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
SRRT-208ENST00000469602 LPAR1Q92633 364 aa11.56□□□□□ -0.56
SRRT-208ENST00000469602 RPAP3Q9H6T3 665 aaPredicted RBP11.56□□□□□ -0.56
SRRT-208ENST00000469602 VCPKMTQ9H867 229 aa11.56□□□□□ -0.56
SRRT-208ENST00000469602 MORF4L1Q9UBU8 362 aa11.56□□□□□ -0.56
SRRT-208ENST00000469602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.56□□□□□ -0.56
SRRT-208ENST00000469602 ORC4O43929 436 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 TSPY3P0CV98 308 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 TSPY8P0CW00 308 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 PRMT2P55345 433 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 NEDD1Q8NHV4 660 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 TANGO6Q9C0B7 1094 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
SRRT-208ENST00000469602 A0A0G2JMZ2 1700 aa11.55□□□□□ -0.56
SRRT-208ENST00000469602 FGRP09769 529 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 CHMLP26374 656 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 HOXD10P28358 340 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 HAND2P61296 217 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 TFAP4Q01664 338 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 RUFY2Q8WXA3 655 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 CEP95Q96GE4 821 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 DSCC1Q9BVC3 393 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 IL25Q9H293 177 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 TXNRD2Q9NNW7 524 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 INCENPQ9NQS7 918 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 MTMR4Q9NYA4 1195 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 RBPJLQ9UBG7 517 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 SRRDQ9UH36 339 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 SYNPO2Q9UMS6 1093 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 TACC3Q9Y6A5 838 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 RAD50Q92878 1312 aa11.54□□□□□ -0.56
SRRT-208ENST00000469602 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 TSPY2A6NKD2 308 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 TNPO2O14787 897 aaKnown RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 RANBP6O60518 1105 aaKnown RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 PEX10O60683 326 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 TTLL1O95922 423 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
SRRT-208ENST00000469602 ERVK-9P63128 1117 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 ERVK-24P63145 666 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 COG2Q14746 738 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 LBX2Q6XYB7 198 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 SKAP1Q86WV1 359 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 MKL1Q969V6 931 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 PAGR1Q9BTK6 254 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 NBPF3Q9H094 633 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 HOXC10Q9NYD6 342 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
SRRT-208ENST00000469602 F5H6K3 240 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 ZNF213O14771 459 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RAD21O60216 631 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 FLOT1O75955 427 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 NDUFB10O96000 172 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 PRKCZQ05513 592 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 KLRC3Q07444 240 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 SLC9C1Q4G0N8 1177 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.57
SRRT-208ENST00000469602 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RAET1EQ8TD07 263 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 STAG1Q8WVM7 1258 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 COA7Q96BR5 231 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 ARMC5Q96C12 935 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RNF41Q9H4P4 317 aaPredicted RBP11.52□□□□□ -0.57
SRRT-208ENST00000469602 TOMM22Q9NS69 142 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 CTNNA3Q9UI47 895 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RABGAP1Q9Y3P9 1069 aa11.52□□□□□ -0.57
SRRT-208ENST00000469602 RBBP6Q7Z6E9 1792 aaKnown RBP11.51□□□□□ -0.57
SRRT-208ENST00000469602 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
SRRT-208ENST00000469602 NMT2O60551 498 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 CNMDO75829 334 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 MAPK4P31152 587 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 DSG3P32926 999 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 Q3C1V9 767 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
SRRT-208ENST00000469602 MB21D1Q8N884 522 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 IL17RBQ9NRM6 502 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 BTBD7Q9P203 1132 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 GABRQQ9UN88 632 aa11.51□□□□□ -0.57
SRRT-208ENST00000469602 SGSM2O43147 1006 aa11.5□□□□□ -0.57
SRRT-208ENST00000469602 NOVP48745 357 aa11.5□□□□□ -0.57
SRRT-208ENST00000469602 FLT3LGP49771 235 aa11.5□□□□□ -0.57
SRRT-208ENST00000469602 NT5C2P49902 561 aa11.5□□□□□ -0.57
SRRT-208ENST00000469602 CCNA1P78396 465 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms