RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 COG2Q14746 738 aa14.86□□□□□ -0.03
HDAC3-204ENST00000469207 TTF1Q15361 905 aaPredicted RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 MFSD14CQ5VZR4 134 aa14.86□□□□□ -0.03
HDAC3-204ENST00000469207 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 LBX2Q6XYB7 198 aa14.86□□□□□ -0.03
HDAC3-204ENST00000469207 SPICE1Q8N0Z3 855 aa14.86□□□□□ -0.03
HDAC3-204ENST00000469207 CLASRPQ8N2M8 674 aaKnown RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 UBE2OQ9C0C9 1292 aaKnown RBP14.86□□□□□ -0.03
HDAC3-204ENST00000469207 DNAH12Q6ZR08 3092 aa14.86□□□□□ -0.03
HDAC3-204ENST00000469207 COBLO75128 1261 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 GLRX3O76003 335 aaKnown RBP14.85□□□□□ -0.03
HDAC3-204ENST00000469207 AKR1B1P15121 316 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 HSP90AB4PQ58FF6 505 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 TDHQ8IZJ6 230 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 DEFB123Q8N688 67 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 TANGO6Q9C0B7 1094 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
HDAC3-204ENST00000469207 IVNS1ABPQ9Y6Y0 642 aa14.85□□□□□ -0.03
HDAC3-204ENST00000469207 MBD4O95243 580 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 IGHA2P01877 340 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 HOXC6P09630 235 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 ERCC3P19447 782 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 ADORA2AP29274 412 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 PLS1Q14651 629 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 GJC2Q5T442 439 aaPredicted RBP14.84□□□□□ -0.03
HDAC3-204ENST00000469207 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
HDAC3-204ENST00000469207 KIF1BPQ96EK5 621 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 ZBTB40Q9NUA8 1239 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 HOXC10Q9NYD6 342 aa14.84□□□□□ -0.03
HDAC3-204ENST00000469207 ADD2P35612 726 aa14.83□□□□□ -0.04
HDAC3-204ENST00000469207 LRIT3Q3SXY7 679 aa14.83□□□□□ -0.04
HDAC3-204ENST00000469207 DIEXFQ68CQ4 756 aaKnown RBP14.83□□□□□ -0.04
HDAC3-204ENST00000469207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC3-204ENST00000469207 ATG4CQ96DT6 458 aa14.83□□□□□ -0.04
HDAC3-204ENST00000469207 SPATC1LQ9H0A9 340 aa14.83□□□□□ -0.04
HDAC3-204ENST00000469207 PAG1Q9NWQ8 432 aa14.83□□□□□ -0.04
HDAC3-204ENST00000469207 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 USP17L21D6R901 530 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 DLL1O00548 723 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 SMARCA5O60264 1052 aaPredicted RBP14.82□□□□□ -0.04
HDAC3-204ENST00000469207 CYBAP13498 195 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 DSG3P32926 999 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 CDK8P49336 464 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 TMED8Q6PL24 325 aaPredicted RBP14.82□□□□□ -0.04
HDAC3-204ENST00000469207 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 NCAPG2Q86XI2 1143 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 LPAR1Q92633 364 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
HDAC3-204ENST00000469207 FLOT1O75955 427 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
HDAC3-204ENST00000469207 C20orf194Q5TEA3 1177 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 C12orf60Q5U649 245 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 FBXO28Q9NVF7 368 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 TMX2Q9Y320 296 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 RLFQ13129 1914 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
HDAC3-204ENST00000469207 RAB11FIP3O75154 756 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 EEF2P13639 858 aaKnown RBP14.8□□□□□ -0.04
HDAC3-204ENST00000469207 ATP5JP18859 108 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 ICA1Q05084 483 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 TMEM132BQ14DG7 1078 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 HAUS7Q99871 368 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 PUS7LQ9H0K6 701 aaKnown RBP14.8□□□□□ -0.04
HDAC3-204ENST00000469207 VCPKMTQ9H867 229 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 MTMR10Q9NXD2 777 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 SWAP70Q9UH65 585 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 FRMPD3Q5JV73 1810 aa14.8□□□□□ -0.04
HDAC3-204ENST00000469207 BAZ2AQ9UIF9 1905 aaKnown RBP14.8□□□□□ -0.04
HDAC3-204ENST00000469207 DNM1LO00429 736 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 STRNO43815 780 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 HMMRO75330 724 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 RTP1P59025 263 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 FERMT2Q96AC1 680 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 ATP8A2Q9NTI2 1148 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 DDX19BQ9UMR2 479 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 SLC4A4Q9Y6R1 1079 aa14.79□□□□□ -0.04
HDAC3-204ENST00000469207 A0A0C4DFX4 3053 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 RAD21O60216 631 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 MSCO60682 206 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 PGK2P07205 417 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 SLC39A5Q6ZMH5 540 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 SHCBP1Q8NEM2 672 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 MAML3Q96JK9 1138 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
HDAC3-204ENST00000469207 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC3-204ENST00000469207 SEPT4O43236 478 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 MS4A1P11836 297 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 TAL1P17542 331 aaPredicted RBP14.77□□□□□ -0.05
HDAC3-204ENST00000469207 ADCYAP1R1P41586 468 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 C16orf86Q6ZW13 317 aa14.77□□□□□ -0.05
HDAC3-204ENST00000469207 SH3RF1Q7Z6J0 888 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms