RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 PPFIA3O75145 1194 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 ATP2B2Q01814 1243 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 PNMA8AQ86V59 439 aaPredicted RBP27.4■■□□□ 1.98
MTA1-209ENST00000469140 RGS22Q8NE09 1264 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 SLC26A6Q9BXS9 759 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 RNF26Q9BY78 433 aaPredicted RBP27.4■■□□□ 1.98
MTA1-209ENST00000469140 MAD2L2Q9UI95 211 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 WDR90Q96KV7 1748 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 PALM3A6NDB9 673 aaPredicted RBP27.4■■□□□ 1.98
MTA1-209ENST00000469140 POTECB2RU33 542 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 FUT2Q10981 343 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 SIAH1Q8IUQ4 282 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 LRRC47Q8N1G4 583 aaKnown RBP27.4■■□□□ 1.98
MTA1-209ENST00000469140 WASF1Q92558 559 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 TNPO1Q92973 898 aaKnown RBP27.4■■□□□ 1.98
MTA1-209ENST00000469140 LZTS2Q9BRK4 669 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 ZNF341Q9BYN7 854 aa27.4■■□□□ 1.98
MTA1-209ENST00000469140 PLEKHA8P1O95397 391 aa27.39■■□□□ 1.97
MTA1-209ENST00000469140 ASNSP08243 561 aa27.39■■□□□ 1.97
MTA1-209ENST00000469140 PARP1P09874 1014 aaKnown RBP27.39■■□□□ 1.97
MTA1-209ENST00000469140 ZSCAN22P10073 491 aaPredicted RBP27.39■■□□□ 1.97
MTA1-209ENST00000469140 MTMR6Q9Y217 621 aa27.39■■□□□ 1.97
MTA1-209ENST00000469140 CTNND1O60716 968 aaKnown RBP27.38■■□□□ 1.97
MTA1-209ENST00000469140 SNHG28P0DPA3 235 aa27.38■■□□□ 1.97
MTA1-209ENST00000469140 CMTR1Q8N1G2 835 aaKnown RBP27.38■■□□□ 1.97
MTA1-209ENST00000469140 CCDC82Q8N4S0 544 aa27.38■■□□□ 1.97
MTA1-209ENST00000469140 VPS37CA5D8V6 355 aaPredicted RBP27.37■■□□□ 1.97
MTA1-209ENST00000469140 H3BQV1 296 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 DEXIO95424 95 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 PDHBP11177 359 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 AKAP17AQ02040 695 aaKnown RBP27.37■■□□□ 1.97
MTA1-209ENST00000469140 IFFO2Q5TF58 517 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 PRAMEF18Q5VWM3 479 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 SRBD1Q8N5C6 995 aaKnown RBP27.37■■□□□ 1.97
MTA1-209ENST00000469140 ZNF112Q9UJU3 913 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 MTMR7Q9Y216 660 aa27.37■■□□□ 1.97
MTA1-209ENST00000469140 PRPF3O43395 683 aaKnown RBP27.36■■□□□ 1.97
MTA1-209ENST00000469140 KRT26Q7Z3Y9 468 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 STAG2Q8N3U4 1231 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 ARHGEF10LQ9HCE6 1279 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 USP17L5A8MUK1 530 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 SMARCA1P28370 1054 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 ASPRV1Q53RT3 343 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 ALG1Q9BT22 464 aa27.36■■□□□ 1.97
MTA1-209ENST00000469140 RBM27Q9P2N5 1060 aaKnown RBP27.36■■□□□ 1.97
MTA1-209ENST00000469140 USP17L2Q6R6M4 530 aa27.35■■□□□ 1.97
MTA1-209ENST00000469140 GMCL1P1Q8NEA9 526 aa27.35■■□□□ 1.97
MTA1-209ENST00000469140 C8orf76Q96K31 380 aa27.35■■□□□ 1.97
MTA1-209ENST00000469140 CNTNAP5Q8WYK1 1306 aa27.34■■□□□ 1.97
MTA1-209ENST00000469140 KLRF2D3W0D1 207 aa27.34■■□□□ 1.97
MTA1-209ENST00000469140 EAPPQ56P03 285 aaPredicted RBP27.34■■□□□ 1.97
MTA1-209ENST00000469140 F13A1P00488 732 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 GPATCH4Q5T3I0 446 aaKnown RBP27.33■■□□□ 1.97
MTA1-209ENST00000469140 FOXD4L5Q5VV16 416 aaPredicted RBP27.33■■□□□ 1.97
MTA1-209ENST00000469140 CLEC17AQ6ZS10 378 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 USP48Q86UV5 1035 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 FOXD4L4Q8WXT5 416 aaPredicted RBP27.33■■□□□ 1.97
MTA1-209ENST00000469140 SH2D4AQ9H788 454 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 V9GY48 417 aaPredicted RBP27.33■■□□□ 1.97
MTA1-209ENST00000469140 MYH4Q9Y623 1939 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 ADM5C9JUS6 153 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 ZNF543Q08ER8 600 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 CDC37L1Q7L3B6 337 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 FBXO18Q8NFZ0 1043 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 DCAF4Q8WV16 495 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 SPZ1Q9BXG8 430 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 TMX2Q9Y320 296 aa27.33■■□□□ 1.97
MTA1-209ENST00000469140 POLR2AP24928 1970 aaKnown RBP27.32■■□□□ 1.96
MTA1-209ENST00000469140 GOLGA8HP0CJ92 632 aa27.32■■□□□ 1.96
MTA1-209ENST00000469140 SLFN13Q68D06 897 aa27.32■■□□□ 1.96
MTA1-209ENST00000469140 GBP4Q96PP9 640 aa27.32■■□□□ 1.96
MTA1-209ENST00000469140 ATP6V1DQ9Y5K8 247 aa27.32■■□□□ 1.96
MTA1-209ENST00000469140 A0A1W2PRG0 241 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 F5H6K3 240 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 KLRC3Q07444 240 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 KLRG1Q96E93 195 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 WRNIP1Q96S55 665 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 SSC5DA1L4H1 1573 aa27.31■■□□□ 1.96
MTA1-209ENST00000469140 VEGFAP15692 232 aaPredicted RBP27.3■■□□□ 1.96
MTA1-209ENST00000469140 INPP5BP32019 993 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 TRIM29Q14134 588 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 RASGRP2Q7LDG7 609 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 GMCL1Q96IK5 515 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 PKN1Q16512 942 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 SCYL3Q8IZE3 742 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 AIFM3Q96NN9 605 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 GOPCQ9HD26 462 aa27.3■■□□□ 1.96
MTA1-209ENST00000469140 SLC1A4P43007 532 aa27.29■■□□□ 1.96
MTA1-209ENST00000469140 FOSBP53539 338 aa27.29■■□□□ 1.96
MTA1-209ENST00000469140 ACER1Q8TDN7 264 aa27.29■■□□□ 1.96
MTA1-209ENST00000469140 ZSCAN16Q9H4T2 348 aaPredicted RBP27.29■■□□□ 1.96
MTA1-209ENST00000469140 FRMPD2Q68DX3 1309 aaPredicted RBP27.28■■□□□ 1.96
MTA1-209ENST00000469140 UBE2Q2LH0YL09 131 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 CYTH3O43739 400 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 PPP1R12BO60237 982 aaPredicted RBP27.28■■□□□ 1.96
MTA1-209ENST00000469140 XBP1P17861 261 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 NF2P35240 595 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 ECE1P42892 770 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 CCDC96Q2M329 555 aa27.28■■□□□ 1.96
MTA1-209ENST00000469140 RAD21O60216 631 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms