RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 FAM86C2PA6NEL3 165 aa8.77□□□□□ -1.01
XRN1-207ENST00000468894 H3BS24 57 aa8.77□□□□□ -1.01
XRN1-207ENST00000468894 EIF6P56537 245 aaKnown RBP8.77□□□□□ -1.01
XRN1-207ENST00000468894 PIWIL2Q8TC59 973 aaKnown RBP8.77□□□□□ -1.01
XRN1-207ENST00000468894 FBXL18Q96ME1 805 aa8.77□□□□□ -1.01
XRN1-207ENST00000468894 SLC6A18Q96N87 628 aa8.77□□□□□ -1.01
XRN1-207ENST00000468894 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.77□□□□□ -1.01
XRN1-207ENST00000468894 CD8BP10966 210 aa8.76□□□□□ -1.01
XRN1-207ENST00000468894 GUCY2CP25092 1073 aa8.76□□□□□ -1.01
XRN1-207ENST00000468894 GP2P55259 537 aaKnown RBP8.76□□□□□ -1.01
XRN1-207ENST00000468894 GNL2Q13823 731 aaKnown RBP8.76□□□□□ -1.01
XRN1-207ENST00000468894 ZYXQ15942 572 aaKnown RBP8.76□□□□□ -1.01
XRN1-207ENST00000468894 INTS3Q68E01 1043 aaKnown RBP8.76□□□□□ -1.01
XRN1-207ENST00000468894 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
XRN1-207ENST00000468894 CRBNQ96SW2 442 aa8.76□□□□□ -1.01
XRN1-207ENST00000468894 STRIP2Q9ULQ0 834 aa8.76□□□□□ -1.01
XRN1-207ENST00000468894 CLEC3AO75596 197 aa8.75□□□□□ -1.01
XRN1-207ENST00000468894 FGRP09769 529 aa8.75□□□□□ -1.01
XRN1-207ENST00000468894 RNF4P78317 190 aa8.75□□□□□ -1.01
XRN1-207ENST00000468894 NBPF12Q5TAG4 269 aaPredicted RBP8.75□□□□□ -1.01
XRN1-207ENST00000468894 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 UNC5AQ6ZN44 842 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 THAP5Q7Z6K1 395 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 NBPF11Q86T75 865 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 FAM169BQ8N8A8 192 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 OR6P1Q8NGX9 317 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 CPLX3Q8WVH0 158 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 ASB11Q8WXH4 323 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 DUSP15Q9H1R2 295 aaPredicted RBP8.74□□□□□ -1.01
XRN1-207ENST00000468894 ATP13A1Q9HD20 1204 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
XRN1-207ENST00000468894 OAS3Q9Y6K5 1087 aaKnown RBP8.74□□□□□ -1.01
XRN1-207ENST00000468894 WASH4PA8MWX3 477 aa8.73□□□□□ -1.01
XRN1-207ENST00000468894 SRFP11831 508 aa8.73□□□□□ -1.01
XRN1-207ENST00000468894 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
XRN1-207ENST00000468894 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
XRN1-207ENST00000468894 SLC43A3Q8NBI5 491 aa8.73□□□□□ -1.01
XRN1-207ENST00000468894 GPR62Q9BZJ7 368 aa8.73□□□□□ -1.01
XRN1-207ENST00000468894 SUCOQ9UBS9 1254 aaKnown RBP8.73□□□□□ -1.01
XRN1-207ENST00000468894 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 ARID5AQ03989 594 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 IKZF1Q13422 519 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 XP32Q5T750 250 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 ABI1Q8IZP0 508 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 C19orf47Q8N9M1 422 aaKnown RBP8.72□□□□□ -1.01
XRN1-207ENST00000468894 ANAPC16Q96DE5 110 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 ZSWIM5Q9P217 1185 aa8.72□□□□□ -1.01
XRN1-207ENST00000468894 C9IYK1 514 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 DNAJA1P31689 397 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 PMS1P54277 932 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 SNW1Q13573 536 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 NBPF9Q3BBW0 867 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 NAALADL2Q58DX5 795 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 ANGEL2Q5VTE6 544 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 TDRD10Q5VZ19 366 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 MCF2L2Q86YR7 1114 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 AGBL5Q8NDL9 886 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 UBE2FQ969M7 185 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.71□□□□□ -1.02
XRN1-207ENST00000468894 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
XRN1-207ENST00000468894 LTBP3Q9NS15 1303 aa8.71□□□□□ -1.02
XRN1-207ENST00000468894 A0A1W2PQH9 124 aa8.7□□□□□ -1.02
XRN1-207ENST00000468894 SSBP05455 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
XRN1-207ENST00000468894 FUT4P22083 530 aa8.7□□□□□ -1.02
XRN1-207ENST00000468894 GAB4Q2WGN9 574 aa8.7□□□□□ -1.02
XRN1-207ENST00000468894 GMLQ99445 158 aa8.7□□□□□ -1.02
XRN1-207ENST00000468894 MRVI1Q9Y6F6 885 aa8.7□□□□□ -1.02
XRN1-207ENST00000468894 PLCL1Q15111 1095 aa8.69□□□□□ -1.02
XRN1-207ENST00000468894 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
XRN1-207ENST00000468894 DHRS1Q96LJ7 313 aa8.69□□□□□ -1.02
XRN1-207ENST00000468894 TRIT1Q9H3H1 467 aaKnown RBP8.69□□□□□ -1.02
XRN1-207ENST00000468894 GPATCH2Q9NW75 528 aa8.69□□□□□ -1.02
XRN1-207ENST00000468894 ADAMTS6Q9UKP5 1117 aa8.69□□□□□ -1.02
XRN1-207ENST00000468894 SHOXO15266 292 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 ESR1P03372 595 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 TPP2P29144 1249 aaPredicted RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 CASP7P55210 303 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 ZP2Q05996 745 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 NMIQ13287 307 aaPredicted RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 TSPYL5Q86VY4 417 aaPredicted RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 C8orf37Q96NL8 207 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 PRDM14Q9GZV8 571 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 CARS2Q9HA77 564 aaKnown RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 PRDM7Q9NQW5 492 aa8.68□□□□□ -1.02
XRN1-207ENST00000468894 ZNF214Q9UL59 606 aaPredicted RBP8.68□□□□□ -1.02
XRN1-207ENST00000468894 FAM86C1Q9NVL1 165 aa8.67□□□□□ -1.02
XRN1-207ENST00000468894 SLC12A7Q9Y666 1083 aa8.67□□□□□ -1.02
XRN1-207ENST00000468894 ETFBP38117 255 aa8.66□□□□□ -1.02
XRN1-207ENST00000468894 AUHQ13825 339 aaKnown RBP8.66□□□□□ -1.02
XRN1-207ENST00000468894 PPP2R5EQ16537 467 aa8.66□□□□□ -1.02
XRN1-207ENST00000468894 ZNF792Q3KQV3 632 aa8.66□□□□□ -1.02
XRN1-207ENST00000468894 AXDND1Q5T1B0 1012 aaPredicted RBP8.66□□□□□ -1.02
XRN1-207ENST00000468894 TMPRSS7Q7RTY8 843 aa8.66□□□□□ -1.02
XRN1-207ENST00000468894 CCDC144CPQ8IYA2 1237 aa8.66□□□□□ -1.02
XRN1-207ENST00000468894 SMARCC1Q92922 1105 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms