RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 APBB1O00213 710 aa14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■■□ 23.1
ARHGEF39-202ENST00000468876 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 ADGRA1Q86SQ6 560 aa14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 CD320Q9NPF0 282 aa14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 RAI14Q9P0K7 980 aa14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 RBPJLQ9UBG7 517 aa14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 DBNLQ9UJU6 430 aaKnown RBP14.3□□□□□ -0.12
ARHGEF39-202ENST00000468876 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 OS9Q13438 667 aaPredicted RBP14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 LRRC41Q15345 812 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 TMEM240Q5SV17 173 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 PPP2R2DQ66LE6 453 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 HLA-CQ95604 372 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 PHOX2BQ99453 314 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 YBX2Q9Y2T7 364 aaKnown RBP14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 FOCADQ5VW36 1801 aa14.29□□□□□ -0.12
ARHGEF39-202ENST00000468876 USP17L5A8MUK1 530 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 DCDC2CA8MYV0 355 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 LOC285556D6RIA3 1793 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 CYBAP13498 195 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 SSTR3P32745 418 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 MAP3K10Q02779 954 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 RRP1BQ14684 758 aaKnown RBP14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 SH3D19Q5HYK7 790 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 SLF2Q8IX21 1173 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 SH3RF3Q8TEJ3 882 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 OSBPL5Q9H0X9 879 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 AS3MTQ9HBK9 375 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 PIH1D3Q9NQM4 214 aaKnown RBP14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 IVNS1ABPQ9Y6Y0 642 aa14.28□□□□□ -0.12
ARHGEF39-202ENST00000468876 SLC15A5A6NIM6 579 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 TIMP1P01033 207 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 CYP2E1P05181 493 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 ACRP10323 421 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 ALADP13716 330 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 ZAP70P43403 619 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 CCNA1P78396 465 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 MTMR2Q13614 643 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 ZNF365Q70YC5 407 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 NPLOC4Q8TAT6 608 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 GPR108Q9NPR9 543 aa14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
ARHGEF39-202ENST00000468876 SEPT4O43236 478 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 UQCRFS1P1P0C7P4 283 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 HOXA7P31268 230 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 FAAP100Q0VG06 881 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 MFSD5Q6N075 450 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 C16orf59Q7L2K0 433 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 TEX11Q8IYF3 940 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 GJD3Q8N144 294 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 CCDC8Q9H0W5 538 aaPredicted RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 EXOC6BQ9Y2D4 811 aa14.26□□□□□ -0.13
ARHGEF39-202ENST00000468876 XIRP2A4UGR9 3374 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 RFXAPO00287 272 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 PTPREP23469 700 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 GSTO1P78417 241 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 FAM47AQ5JRC9 791 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 NAA16Q6N069 864 aaPredicted RBP14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 DNAJC18Q9H819 358 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
ARHGEF39-202ENST00000468876 FLT1P17948 1338 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 CSF2RAP15509 400 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 RABGGTBP53611 331 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 DPP9Q86TI2 863 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 MAPKAPK5Q8IW41 473 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 TMEM199Q8N511 208 aa14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 YTHDC1Q96MU7 727 aaKnown RBP14.24□□□□□ -0.13
ARHGEF39-202ENST00000468876 LDHCP07864 332 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 HOXC6P09630 235 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 BACE1P56817 501 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 JAG1P78504 1218 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 CCDC158Q5M9N0 1113 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 KRT40Q6A162 431 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 ANTXR1Q9H6X2 564 aa14.23□□□□□ -0.13
ARHGEF39-202ENST00000468876 A0A1W2PQ45 241 aaPredicted RBP14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 A0A1W2PQY0 241 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 TBC1D12O60347 775 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 MYOGP15173 224 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 CAP2P40123 477 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 PRAMEF19Q5SWL8 479 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 RNF180Q86T96 592 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 TGFBRAP1Q8WUH2 860 aa14.22□□□□□ -0.13
ARHGEF39-202ENST00000468876 ZNF512BQ96KM6 892 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms