RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 FAM86C2PA6NEL3 165 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 PGK1P00558 417 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 RARBP10826 455 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 VCAM1P19320 739 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 IL15P40933 162 aaPredicted RBP13.74□□□□□ -0.21
NEDD9-207ENST00000468612 MRE11P49959 708 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 RNF180Q86T96 592 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 MOV10L1Q9BXT6 1211 aaKnown RBP13.74□□□□□ -0.21
NEDD9-207ENST00000468612 NRBP1Q9UHY1 535 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 YBX2Q9Y2T7 364 aaKnown RBP13.74□□□□□ -0.21
NEDD9-207ENST00000468612 WDFY4Q6ZS81 3184 aa13.74□□□□□ -0.21
NEDD9-207ENST00000468612 TLL1O43897 1013 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 GH2P01242 217 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 USP14P54578 494 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 TIMM10P62072 90 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 PSRC1Q6PGN9 363 aaPredicted RBP13.73□□□□□ -0.21
NEDD9-207ENST00000468612 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
NEDD9-207ENST00000468612 SHCBP1Q8NEM2 672 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 MAML3Q96JK9 1138 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 FEZ1Q99689 392 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 SLC28A3Q9HAS3 691 aa13.73□□□□□ -0.21
NEDD9-207ENST00000468612 ROBO3Q96MS0 1386 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 FLT1P17948 1338 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 CSF2RAP15509 400 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 TBC1D9Q6ZT07 1266 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 ABRAQ8N0Z2 381 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 TSEN34Q9BSV6 310 aaKnown RBP13.72□□□□□ -0.21
NEDD9-207ENST00000468612 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 SLC5A4Q9NY91 659 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 HMG20BQ9P0W2 317 aa13.72□□□□□ -0.21
NEDD9-207ENST00000468612 ZNF521Q96K83 1311 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 ADAMTS4O75173 837 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 ACRP10323 421 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 ERCC3P19447 782 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 SPATC1LQ9H0A9 340 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 RPAP3Q9H6T3 665 aaPredicted RBP13.71□□□□□ -0.21
NEDD9-207ENST00000468612 STARD7Q9NQZ5 370 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 RAI14Q9P0K7 980 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 GBF1Q92538 1859 aa13.71□□□□□ -0.21
NEDD9-207ENST00000468612 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.22
NEDD9-207ENST00000468612 LRRC37A2A6NM11 1700 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 PI4K2BG5E9Z4 385 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 SMIM22K7EJ46 135 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 POU3F3P20264 500 aaPredicted RBP13.7□□□□□ -0.22
NEDD9-207ENST00000468612 ACLYP53396 1101 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 MVPQ14764 893 aaKnown RBP13.7□□□□□ -0.22
NEDD9-207ENST00000468612 SKIV2LQ15477 1246 aaKnown RBP13.7□□□□□ -0.22
NEDD9-207ENST00000468612 TMEM199Q8N511 208 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 COG5Q9UP83 839 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 PA2G4Q9UQ80 394 aaKnown RBP13.7□□□□□ -0.22
NEDD9-207ENST00000468612 CDK5RAP2Q96SN8 1893 aa13.7□□□□□ -0.22
NEDD9-207ENST00000468612 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 A0A1B0GUL7 405 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 MOXD2PA6NHM9 499 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 PLCG2P16885 1265 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 TAL1P17542 331 aaPredicted RBP13.69□□□□□ -0.22
NEDD9-207ENST00000468612 CDK7P50613 346 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 PPP4CP60510 307 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 CCSAPQ6IQ19 270 aaPredicted RBP13.69□□□□□ -0.22
NEDD9-207ENST00000468612 TATDN1Q6P1N9 297 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 SPATA5Q8NB90 893 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 KLHDC9Q8NEP7 349 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 LENG1Q96BZ8 264 aaPredicted RBP13.69□□□□□ -0.22
NEDD9-207ENST00000468612 IL23AQ9NPF7 189 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 AATFQ9NY61 560 aaKnown RBP eCLIP13.69□□□□□ -0.22
NEDD9-207ENST00000468612 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 A0A0G2JMZ2 1700 aa13.69□□□□□ -0.22
NEDD9-207ENST00000468612 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 BAG3O95817 575 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
NEDD9-207ENST00000468612 COG2Q14746 738 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
NEDD9-207ENST00000468612 NOL10Q9BSC4 688 aaKnown RBP13.68□□□□□ -0.22
NEDD9-207ENST00000468612 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
NEDD9-207ENST00000468612 MROH8Q9H579 483 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 COPRSQ9NQ92 184 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 HOXC10Q9NYD6 342 aa13.68□□□□□ -0.22
NEDD9-207ENST00000468612 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
NEDD9-207ENST00000468612 PTPRCP08575 1304 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 AKR1A1P14550 325 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 RAB3GAP1Q15042 981 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 ATF7IPQ6VMQ6 1270 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 TINF2Q9BSI4 451 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 CD320Q9NPF0 282 aa13.67□□□□□ -0.22
NEDD9-207ENST00000468612 ELP1O95163 1332 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms