RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 FOSBP53539 338 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 PICALMQ13492 652 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 TNIP1Q15025 636 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 OTUD7BQ6GQQ9 843 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 GAS2L3Q86XJ1 694 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 SRBD1Q8N5C6 995 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 DAGLBQ8NCG7 672 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 DACT1Q9NYF0 836 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 HOOK1Q9UJC3 728 aaKnown RBP11.72□□□□□ -0.53
MSH5-213ENST00000468136 PSME4Q14997 1843 aa11.72□□□□□ -0.53
MSH5-213ENST00000468136 KIF28PB7ZC32 967 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 SMIM22K7EJ46 135 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 PLEKHA8P1O95397 391 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 GNA11P29992 359 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
MSH5-213ENST00000468136 CFAP100Q494V2 611 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 MKL1Q969V6 931 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 GMLQ99445 158 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 GLT8D2Q9H1C3 349 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 TAOK3Q9H2K8 898 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 KANSL2Q9H9L4 492 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.53
MSH5-213ENST00000468136 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.53
MSH5-213ENST00000468136 ESYT2A0FGR8 921 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 BTBD18B2RXH4 712 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 KLRF2D3W0D1 207 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 MYO1BO43795 1136 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 NMT2O60551 498 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 SNHG28P0DPA3 235 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 LIG1P18858 919 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 NLRP5P59047 1200 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 PTPAQ15257 358 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 DLGAP5Q15398 846 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 SASS6Q6UVJ0 657 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 FAM83AQ86UY5 434 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
MSH5-213ENST00000468136 FSIP1Q8NA03 581 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 SLC44A5Q8NCS7 719 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 ENGASEQ8NFI3 743 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 RRP36Q96EU6 259 aaKnown RBP11.7□□□□□ -0.54
MSH5-213ENST00000468136 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 GINM1Q9NU53 330 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 ZNF219Q9P2Y4 722 aaPredicted RBP11.7□□□□□ -0.54
MSH5-213ENST00000468136 SEC63Q9UGP8 760 aaKnown RBP11.7□□□□□ -0.54
MSH5-213ENST00000468136 CLIC4Q9Y696 253 aa11.7□□□□□ -0.54
MSH5-213ENST00000468136 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 YDJCA8MPS7 323 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 TBC1D12O60347 775 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 DTNBO60941 627 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 SHMT1P34896 483 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 CEBPZQ03701 1054 aaKnown RBP11.69□□□□□ -0.54
MSH5-213ENST00000468136 TRAF1Q13077 416 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
MSH5-213ENST00000468136 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 KANK3Q6NY19 840 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 CCDC82Q8N4S0 544 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 PPP1R9BQ96SB3 815 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 FUCA2Q9BTY2 467 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 RIOX1Q9H6W3 641 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 FAM13BQ9NYF5 915 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 PCDHA4Q9UN74 947 aa11.69□□□□□ -0.54
MSH5-213ENST00000468136 ECM29Q5VYK3 1845 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 LAD1O00515 517 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 NR1I2O75469 434 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 PTPREP23469 700 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 EVX2Q03828 476 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 ZRSR1Q15695 479 aaKnown RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 CIAPIN1Q6FI81 312 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 BLIDQ8IZY5 108 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 MXD3Q9BW11 206 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 NAT10Q9H0A0 1025 aaKnown RBP11.68□□□□□ -0.54
MSH5-213ENST00000468136 RBSNQ9H1K0 784 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 C6orf50Q9HD87 102 aa11.68□□□□□ -0.54
MSH5-213ENST00000468136 CABP5Q9NP86 173 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms