RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RABEP1Q15276 862 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 USP17L2Q6R6M4 530 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 LRRC47Q8N1G4 583 aaKnown RBP17.84■□□□□ 0.45
SNIP1-202ENST00000468040 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 LPAR1Q92633 364 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 KIF2CQ99661 725 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 VCPKMTQ9H867 229 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 LY9Q9HBG7 655 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 PDRG1Q9NUG6 133 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
SNIP1-202ENST00000468040 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.44
SNIP1-202ENST00000468040 FAM155AB1AL88 458 aaPredicted RBP17.83■□□□□ 0.44
SNIP1-202ENST00000468040 CETPP11597 493 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 MKRN3Q13064 507 aaKnown RBP17.83■□□□□ 0.44
SNIP1-202ENST00000468040 NOGQ13253 232 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 CYP4F22Q6NT55 531 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 Q6ZUG5 572 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 FASTKD5Q7L8L6 764 aaKnown RBP17.83■□□□□ 0.44
SNIP1-202ENST00000468040 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.44
SNIP1-202ENST00000468040 CAPNS2Q96L46 248 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 C12orf42Q96LP6 360 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
SNIP1-202ENST00000468040 MANSC4A6NHS7 340 aaPredicted RBP17.82■□□□□ 0.44
SNIP1-202ENST00000468040 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 NEK4P51957 841 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 HMGCS2P54868 508 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
SNIP1-202ENST00000468040 NFXL1Q6ZNB6 911 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 SGMS1Q86VZ5 419 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 PROCA1Q8NCQ7 364 aaPredicted RBP17.82■□□□□ 0.44
SNIP1-202ENST00000468040 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 AGXT2Q9BYV1 514 aa17.82■□□□□ 0.44
SNIP1-202ENST00000468040 PTPRFP10586 1907 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 F5H6K3 240 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 KLRC3Q07444 240 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 GRM1Q13255 1194 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 ANKRD1Q15327 319 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 ALDH8A1Q9H2A2 487 aaPredicted RBP17.81■□□□□ 0.44
SNIP1-202ENST00000468040 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
SNIP1-202ENST00000468040 EMILIN3Q9NT22 766 aa17.81■□□□□ 0.44
SNIP1-202ENST00000468040 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 RAD21O60216 631 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 NDUFB10O96000 172 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 INHBEP58166 350 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 HTRA3P83110 453 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 SREBF2Q12772 1141 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 CCL15Q16663 113 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 SLFN13Q68D06 897 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 SYNE3Q6ZMZ3 975 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
SNIP1-202ENST00000468040 BRF1Q92994 677 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 GMCL1Q96IK5 515 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 SENP2Q9HC62 589 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 SLC12A7Q9Y666 1083 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 LOC285556D6RIA3 1793 aa17.8■□□□□ 0.44
SNIP1-202ENST00000468040 WDR33Q9C0J8 1336 aaKnown RBP17.79■□□□□ 0.44
SNIP1-202ENST00000468040 TESPA1A2RU30 521 aaPredicted RBP17.79■□□□□ 0.44
SNIP1-202ENST00000468040 WDR46O15213 610 aaKnown RBP17.79■□□□□ 0.44
SNIP1-202ENST00000468040 ST18O60284 1047 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 DDAH1O94760 285 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 CALM1P0DP23 149 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 CALM2P0DP24 149 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 CALM3P0DP25 149 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 VCAM1P19320 739 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 GADL1Q6ZQY3 521 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 ZNF654Q8IZM8 581 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 SPICE1Q8N0Z3 855 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
SNIP1-202ENST00000468040 PDHBP11177 359 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 MAP2K2P36507 400 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 SLC1A4P43007 532 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 VEGFBP49765 207 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNIP1-202ENST00000468040 TOB2Q14106 344 aaPredicted RBP17.78■□□□□ 0.44
SNIP1-202ENST00000468040 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 AGTPBP1Q9UPW5 1226 aa17.78■□□□□ 0.44
SNIP1-202ENST00000468040 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 SNHG28P0DPA3 235 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 BMP3P12645 472 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 RCAN1P53805 252 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 AK2P54819 239 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 EVCP57679 992 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 KIF23Q02241 960 aaPredicted RBP17.77■□□□□ 0.44
SNIP1-202ENST00000468040 TROAPQ12815 778 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 DGKZQ13574 1117 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 MOGSQ13724 837 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 KIAA1755Q5JYT7 1200 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 APOA5Q6Q788 366 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 MAP3K14Q99558 947 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 MTMR7Q9Y216 660 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 SLC45A1Q9Y2W3 748 aa17.77■□□□□ 0.44
SNIP1-202ENST00000468040 ZBTB43O43298 467 aa17.76■□□□□ 0.43
SNIP1-202ENST00000468040 APOBRQ0VD83 1088 aa17.76■□□□□ 0.43
SNIP1-202ENST00000468040 CCDC96Q2M329 555 aa17.76■□□□□ 0.43
SNIP1-202ENST00000468040 ASPRV1Q53RT3 343 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms