RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 CCDC171Q6TFL3 1326 aa18.08■□□□□ 0.49
ATG4B-215ENST00000468018 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-215ENST00000468018 PEX10O60683 326 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 CNMDO75829 334 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 FGRP09769 529 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.48
ATG4B-215ENST00000468018 GSPT1P15170 499 aaKnown RBP18.08■□□□□ 0.48
ATG4B-215ENST00000468018 SOX10P56693 466 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 RPAP3Q9H6T3 665 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-215ENST00000468018 SH2D4AQ9H788 454 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 MKNK2Q9HBH9 465 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 TACC3Q9Y6A5 838 aa18.08■□□□□ 0.48
ATG4B-215ENST00000468018 TNPO2O14787 897 aaKnown RBP18.07■□□□□ 0.48
ATG4B-215ENST00000468018 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-215ENST00000468018 ERVK-9P63128 1117 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 ERVK-24P63145 666 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 IRF5Q13568 498 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 Q3C1V9 767 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 SLC9C1Q4G0N8 1177 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 ZNF287Q9HBT7 754 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 NYAP2Q9P242 653 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 GJD2Q9UKL4 321 aa18.07■□□□□ 0.48
ATG4B-215ENST00000468018 ZNFX1Q9P2E3 1918 aaKnown RBP18.06■□□□□ 0.48
ATG4B-215ENST00000468018 PRDM1O75626 825 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 FGAP02671 866 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 FLT3LGP49771 235 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 STK11IPQ8N1F8 1099 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 GPRC5AQ8NFJ5 357 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 RABGAP1Q9Y3P9 1069 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 ZNF236Q9UL36 1845 aa18.06■□□□□ 0.48
ATG4B-215ENST00000468018 WDR46O15213 610 aaKnown RBP18.05■□□□□ 0.48
ATG4B-215ENST00000468018 PDE4BQ07343 736 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 NBPF11Q86T75 865 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 NEDD1Q8NHV4 660 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 RAET1EQ8TD07 263 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 PXYLP1Q8TE99 480 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 SH3TC2Q8TF17 1288 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 MKL1Q969V6 931 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 COA7Q96BR5 231 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 SYNPO2Q9UMS6 1093 aa18.05■□□□□ 0.48
ATG4B-215ENST00000468018 HIP1O00291 1037 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 SLC3A2P08195 630 aaKnown RBP18.04■□□□□ 0.48
ATG4B-215ENST00000468018 GRK4P32298 578 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 COG2Q14746 738 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 ZNF444Q8N0Y2 327 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-215ENST00000468018 SLAIN1Q8ND83 568 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 CEP95Q96GE4 821 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 PORCNQ9H237 461 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 MTMR4Q9NYA4 1195 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 BTBD7Q9P203 1132 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 ADAMTS5Q9UNA0 930 aa18.04■□□□□ 0.48
ATG4B-215ENST00000468018 MKI67P46013 3256 aaKnown RBP18.03■□□□□ 0.48
ATG4B-215ENST00000468018 POTEFA5A3E0 1075 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 ORC4O43929 436 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 DSG3P32926 999 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 NOVP48745 357 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 CTDSPL2Q05D32 466 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 CWC27Q6UX04 472 aaKnown RBP18.03■□□□□ 0.48
ATG4B-215ENST00000468018 SPICE1Q8N0Z3 855 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 USP6NLQ92738 828 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 IL25Q9H293 177 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
ATG4B-215ENST00000468018 MAPK4P31152 587 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 MFAP1P55081 439 aaKnown RBP18.02■□□□□ 0.48
ATG4B-215ENST00000468018 PDE4DIPQ5VU43 2346 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 PAGR1Q9BTK6 254 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 NBPF3Q9H094 633 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
ATG4B-215ENST00000468018 ADCY3O60266 1144 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TTLL1O95922 423 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TSPY3P0CV98 308 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TSPY8P0CW00 308 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TFAP4Q01664 338 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 MLLT1Q03111 559 aaPredicted RBP18.01■□□□□ 0.47
ATG4B-215ENST00000468018 FAM47AQ5JRC9 791 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 MORN1Q5T089 497 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 GPR142Q7Z601 462 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 MB21D1Q8N884 522 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 IL17RBQ9NRM6 502 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
ATG4B-215ENST00000468018 TNRC18O15417 2968 aaPredicted RBP18■□□□□ 0.47
ATG4B-215ENST00000468018 CCNA1P78396 465 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 ATP2B2Q01814 1243 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 MTFR1Q15390 333 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 GMCL1P1Q8NEA9 526 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 DSCC1Q9BVC3 393 aa18■□□□□ 0.47
ATG4B-215ENST00000468018 RAD50Q92878 1312 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 F5H6K3 240 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 FLOT1O75955 427 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 NDUFB10O96000 172 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 PCP11498 1178 aaKnown RBP17.99■□□□□ 0.47
ATG4B-215ENST00000468018 XRCC5P13010 732 aaKnown RBP17.99■□□□□ 0.47
ATG4B-215ENST00000468018 KLRC3Q07444 240 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 REPS2Q8NFH8 660 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 ATG4CQ96DT6 458 aa17.99■□□□□ 0.47
ATG4B-215ENST00000468018 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms